[HTML][HTML] Privacy-preserving decentralized learning methods for biomedical applications

M Tajabadi, R Martin, D Heider - Computational and Structural …, 2024 - Elsevier
In recent years, decentralized machine learning has emerged as a significant advancement
in biomedical applications, offering robust solutions for data privacy, security, and …

AI in microbiome‐related healthcare

N Probul, Z Huang, CC Saak… - Microbial …, 2024 - Wiley Online Library
Artificial intelligence (AI) has the potential to transform clinical practice and healthcare.
Following impressive advancements in fields such as computer vision and medical imaging …

Collaborative weighting in federated graph neural networks for disease classification with the human-in-the-loop

C Hausleitner, H Mueller, A Holzinger, B Pfeifer - Scientific Reports, 2024 - nature.com
The authors introduce a novel framework that integrates federated learning with Graph
Neural Networks (GNNs) to classify diseases, incorporating Human-in-the-Loop …

[HTML][HTML] Accessible ecosystem for clinical research (federated learning for everyone): development and usability study

A Pirmani, M Oldenhof, LM Peeters… - JMIR Formative …, 2024 - formative.jmir.org
Background The integrity and reliability of clinical research outcomes rely heavily on access
to vast amounts of data. However, the fragmented distribution of these data across multiple …

Federated singular value decomposition for high-dimensional data

A Hartebrodt, R Röttger, DB Blumenthal - Data Mining and Knowledge …, 2024 - Springer
Federated learning (FL) is emerging as a privacy-aware alternative to classical cloud-based
machine learning. In FL, the sensitive data remains in data silos and only aggregated …

Privacy-by-Design with Federated Learning will drive future Rare Disease Research

S Süwer, MS Ullah, N Probul, A Maier… - Journal of …, 2024 - journals.sagepub.com
Up to 6% of the global population is estimated to be affected by one of about 10,000 distinct
rare diseases (RDs). RDs are, to this day, often not understood, and thus, patients are …

Analysing utility loss in federated learning with differential privacy

A Pustozerova, J Baumbach… - 2023 IEEE 22nd …, 2023 - ieeexplore.ieee.org
Federated learning provides the solution when multiple parties want to collaboratively train a
machine learning model without directly sharing sensitive data. In Federated Learning, each …

FedRBE--a decentralized privacy-preserving federated batch effect correction tool for omics data based on limma

Y Burankova, J Klemm, JJG Lohmann, A Taheri… - arXiv preprint arXiv …, 2024 - arxiv.org
Batch effects in omics data obscure true biological signals and constitute a major challenge
for privacy-preserving analyses of distributed patient data. Existing batch effect correction …

[HTML][HTML] Privacy-Preserving Federated Survival Support Vector Machines for Cross-Institutional Time-To-Event Analysis: Algorithm Development and Validation

J Späth, Z Sewald, N Probul, M Berland, M Almeida… - JMIR AI, 2024 - ai.jmir.org
Background: Central collection of distributed medical patient data is problematic due to strict
privacy regulations. Especially in clinical environments, such as clinical time-to-event …

Privacy-Preserving Multi-Center Differential Protein Abundance Analysis with FedProt

Y Burankova, M Abele, M Bakhtiari, C von Törne… - arXiv preprint arXiv …, 2024 - arxiv.org
Quantitative mass spectrometry has revolutionized proteomics by enabling simultaneous
quantification of thousands of proteins. Pooling patient-derived data from multiple institutions …