Tissue culture-induced DNA methylation in crop plants: A review

A Ghosh, AU Igamberdiev, SC Debnath - Molecular biology reports, 2021 - Springer
Plant tissue culture techniques have been extensively employed in commercial
micropropagation to provide year-round production. Tissue culture regenerants are not …

Exploring the crop epigenome: a comparison of DNA methylation profiling techniques

DR Agius, A Kapazoglou, E Avramidou… - Frontiers in Plant …, 2023 - frontiersin.org
Epigenetic modifications play a vital role in the preservation of genome integrity and in the
regulation of gene expression. DNA methylation, one of the key mechanisms of epigenetic …

Genetic and epigenetic differences associated with environmental gradients in replicate populations of two salt marsh perennials

CM Foust, V Preite, AW Schrey, M Alvarez… - Molecular …, 2016 - Wiley Online Library
While traits and trait plasticity are partly genetically based, investigating epigenetic
mechanisms may provide more nuanced understanding of the mechanisms underlying …

Small ocean temperature increases elicit stage-dependent changes in DNA methylation and gene expression in a fish, the European sea bass

D Anastasiadi, N Díaz, F Piferrer - Scientific Reports, 2017 - nature.com
In natural fish populations, temperature increases can result in shifts in important phenotypic
traits. DNA methylation is an epigenetic mechanism mediating phenotypic changes …

Adaptive plasticity and epigenetic variation in response to warming in an Alpine plant

AB Nicotra, DL Segal, GL Hoyle… - Ecology and …, 2015 - Wiley Online Library
Environmentally induced phenotypic plasticity may be a critical component of response to
changing environments. We examined local differentiation and adaptive phenotypic …

Salt tolerant and sensitive rice varieties display differential methylome flexibility under salt stress

LJ Ferreira, V Azevedo, J Maroco, MM Oliveira… - PLoS …, 2015 - journals.plos.org
DNA methylation has been referred as an important player in plant genomic responses to
environmental stresses but correlations between the methylome plasticity and specific traits …

Chilling-mediated DNA methylation changes during dormancy and its release reveal the importance of epigenetic regulation during winter dormancy in apple (Malus x …

G Kumar, UK Rattan, AK Singh - PloS one, 2016 - journals.plos.org
Winter dormancy is a well known mechanism adopted by temperate plants, to mitigate the
chilling temperature of winters. However, acquisition of sufficient chilling during winter …

Synthesizing the role of epigenetics in the response and adaptation of species to climate change in freshwater ecosystems

G Jeremias, J Barbosa, SM Marques… - Molecular …, 2018 - Wiley Online Library
Freshwater ecosystems are amongst the most threatened ecosystems on Earth. Currently,
climate change is one of the most important drivers of freshwater transformation and its …

Recurrent water deficit causes epigenetic and hormonal changes in citrus plants

DM Neves, LAH Almeida, DDS Santana-Vieira… - Scientific reports, 2017 - nature.com
The present study evaluated the physiological, molecular and hormonal parameters from
scion/rootstock interaction of citrus plants during recurrent water deficit. Responses of the …

Natural epigenetic variation contributes to heritable flowering divergence in a widespread asexual dandelion lineage

RA Wilschut, C Oplaat, LB Snoek, J Kirschner… - Molecular …, 2016 - Wiley Online Library
Epigenetic variation has been proposed to contribute to the success of asexual plants, either
as a contributor to phenotypic plasticity or by enabling transient adaptation via selection on …