Evolving a peptide: library platforms and diversification strategies

K Bozovičar, T Bratkovič - International journal of molecular sciences, 2019 - mdpi.com
Peptides are widely used in pharmaceutical industry as active pharmaceutical ingredients,
versatile tools in drug discovery, and for drug delivery. They find themselves at the …

Universal allosteric mechanism for Gα activation by GPCRs

T Flock, CNJ Ravarani, D Sun, AJ Venkatakrishnan… - Nature, 2015 - nature.com
G protein-coupled receptors (GPCRs) allosterically activate heterotrimeric G proteins and
trigger GDP release. Given that there are∼ 800 human GPCRs and 16 different Gα genes …

Diverse activation pathways in class A GPCRs converge near the G-protein-coupling region

AJ Venkatakrishnan, X Deupi, G Lebon… - Nature, 2016 - nature.com
Class A G-protein-coupled receptors (GPCRs) are a large family of membrane proteins that
mediate a wide variety of physiological functions, including vision, neurotransmission and …

The pocketome of G-protein-coupled receptors reveals previously untargeted allosteric sites

JB Hedderich, M Persechino, K Becker… - Nature …, 2022 - nature.com
G-protein-coupled receptors do not only feature the orthosteric pockets, where most
endogenous agonists bind, but also a multitude of other allosteric pockets that have come …

Capturing peptide–GPCR interactions and their dynamics

A Kaiser, I Coin - Molecules, 2020 - mdpi.com
Many biological functions of peptides are mediated through G protein-coupled receptors
(GPCRs). Upon ligand binding, GPCRs undergo conformational changes that facilitate the …

Molecular determinants of ligand efficacy and potency in GPCR signaling

FM Heydenreich, M Marti-Solano, M Sandhu… - Science, 2023 - science.org
Heterotrimeric guanine nucleotide–binding protein (G protein)–coupled receptors (GPCRs)
bind to extracellular ligands and drugs and modulate intracellular responses through …

Exploring GPCR‐arrestin interfaces with genetically encoded crosslinkers

T Böttke, S Ernicke, R Serfling, C Ihling, E Burda… - EMBO …, 2020 - embopress.org
Abstract β‐arrestins (βarr1 and βarr2) are ubiquitous regulators of G protein‐coupled
receptor (GPCR) signaling. Available data suggest that β‐arrestins dock to different …

Probing Gαi1 protein activation at single–amino acid resolution

D Sun, T Flock, X Deupi, S Maeda, M Matkovic… - Nature structural & …, 2015 - nature.com
We present comprehensive maps at single–amino acid resolution of the residues stabilizing
the human Gαi1 subunit in nucleotide-and receptor-bound states. We generated these maps …

Structural details of a Class B GPCR-arrestin complex revealed by genetically encoded crosslinkers in living cells

Y Aydin, T Böttke, JH Lam, S Ernicke… - Nature …, 2023 - nature.com
Understanding the molecular basis of arrestin-mediated regulation of GPCRs is critical for
deciphering signaling mechanisms and designing functional selectivity. However, structural …

High-throughput mutagenesis using a two-fragment PCR approach

FM Heydenreich, T Miljuš, R Jaussi, R Benoit, D Milić… - Scientific reports, 2017 - nature.com
Site-directed scanning mutagenesis is a powerful protein engineering technique which
allows studies of protein functionality at single amino acid resolution and design of stabilized …