Biochemical and artificial pathways for the reduction of carbon dioxide, nitrite and the competing proton reduction: effect of 2 nd sphere interactions in catalysis

S Amanullah, P Saha, A Nayek, ME Ahmed… - Chemical Society …, 2021 - pubs.rsc.org
Reduction of oxides and oxoanions of carbon and nitrogen are of great contemporary
importance as they are crucial for a sustainable environment. Substantial research has been …

[HTML][HTML] How biology handles nitrite

LB Maia, JJG Moura - Chemical Reviews, 2014 - ACS Publications
Nitrite is one of the players in the broad nitrogen biogeochemical cycle. This nitrogen oxo-
anion is involved in key pathways crucial to life on Earth and to the planetary “recycling” of …

[HTML][HTML] AF2Complex predicts direct physical interactions in multimeric proteins with deep learning

M Gao, D Nakajima An, JM Parks, J Skolnick - Nature communications, 2022 - nature.com
Accurate descriptions of protein-protein interactions are essential for understanding
biological systems. Remarkably accurate atomic structures have been recently computed for …

[HTML][HTML] Nitrite reduction in bacteria: A comprehensive view of nitrite reductases

S Besson, MG Almeida, CM Silveira - Coordination Chemistry Reviews, 2022 - Elsevier
The last years have witnessed a steady increase of social and political awareness for the
need of studying, monitoring, and controlling several anthropological activities that are …

Six-Electron Reduction of Nitrite to Ammonia by Cytochrome c Nitrite Reductase: Insights from Density Functional Theory Studies

D Bykov, F Neese - Inorganic chemistry, 2015 - ACS Publications
In this Forum Article, an extensive discussion of the mechanism of six-electron, seven-proton
nitrite reduction by the cytochrome c nitrite reductase enzyme is presented. On the basis of …

[HTML][HTML] Cytochrome c nitrite reductase from the bacterium Geobacter lovleyi represents a new NrfA subclass

J Campeciño, S Lagishetty, Z Wawrzak… - Journal of Biological …, 2020 - ASBMB
Cytochrome c nitrite reductase (NrfA) catalyzes the reduction of nitrite to ammonium in the
dissimilatory nitrate reduction to ammonium (DNRA) pathway, a process that competes with …

Structure and function of formate-dependent cytochrome c nitrite reductase, NrfA

O Einsle - Methods in enzymology, 2011 - Elsevier
Cytochrome c nitrite reductase, NrfA, catalyzes the six-electron reduction of nitrite, NO 2−, to
ammonium, NH 4+, as the final enzymatic step in the dissimilatory metabolic pathway of …

Distinct nitrite and nitric oxide physiologies in Escherichia coli and Shewanella oneidensis

Q Meng, J Yin, M Jin, H Gao - Applied and Environmental …, 2018 - Am Soc Microbiol
Nitrite has been used as a bacteriostatic agent for centuries in food preservation. It is widely
accepted that this biologically inert molecule functions indirectly, serving as a stable …

Laue crystal structure of Shewanella oneidensis cytochrome c nitrite reductase from a high-yield expression system

M Youngblut, ET Judd, V Srajer, B Sayyed… - JBIC Journal of …, 2012 - Springer
The high-yield expression and purification of Shewanella oneidensis cytochrome c nitrite
reductase (ccNiR) and its characterization by a variety of methods, notably Laue …

Trapping of a Putative Intermediate in the Cytochrome c Nitrite Reductase (ccNiR)-Catalyzed Reduction of Nitrite: Implications for the ccNiR Reaction Mechanism

M Ali, N Stein, Y Mao, S Shahid… - Journal of the …, 2019 - ACS Publications
Cytochrome c nitrite reductase (ccNiR) is a periplasmic, decaheme homodimeric enzyme
that catalyzes the six-electron reduction of nitrite to ammonia. Under standard assay …