Disentangling host–microbiota complexity through hologenomics

A Alberdi, SB Andersen, MT Limborg, RR Dunn… - Nature Reviews …, 2022 - nature.com
Research on animal–microbiota interactions has become a central topic in biological
sciences because of its relevance to basic eco-evolutionary processes and applied …

A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome

TPRA Legrand, JW Wynne, LS Weyrich… - Reviews in …, 2020 - Wiley Online Library
The mucosal surfaces of fish represent an important barrier that supports and regulates a
diverse array of microbial assemblages and contributes to the overall health and fitness of …

[HTML][HTML] Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals

D Bozzi, JA Rasmussen, C Carøe, H Sveier… - Animal microbiome, 2021 - Springer
Background Infectious diseases cause significant production losses in aquaculture every
year. Since the gut microbiota plays an essential role in regulating the host immune system …

Co-diversification of an intestinal Mycoplasma and its salmonid host

JA Rasmussen, P Kiilerich, AS Madhun… - The ISME …, 2023 - academic.oup.com
Understanding the evolutionary relationships between a host and its intestinal resident
bacteria can transform how we understand adaptive phenotypic traits. The interplay between …

[HTML][HTML] Holo-omics for deciphering plant-microbiome interactions

L Xu, G Pierroz, HML Wipf, C Gao, JW Taylor… - Microbiome, 2021 - Springer
Host-microbiome interactions are recognized for their importance to host health. An
improved understanding of the molecular underpinnings of host-microbiome relationships …

[HTML][HTML] Holo-omics: integrated host-microbiota multi-omics for basic and applied biological research

L Nyholm, A Koziol, S Marcos, AB Botnen, O Aizpurua… - Iscience, 2020 - cell.com
From ontogenesis to homeostasis, the phenotypes of complex organisms are shaped by the
bidirectional interactions between the host organisms and their associated microbiota …

[HTML][HTML] Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

JA Rasmussen, KR Villumsen, DA Duchêne… - Communications …, 2021 - nature.com
Salmonids are important sources of protein for a large proportion of the human population.
Mycoplasma species are a major constituent of the gut microbiota of salmonids, often …

Fish disease prevention via microbial dysbiosis‐associated biomarkers in aquaculture

J Mougin, A Joyce - Reviews in Aquaculture, 2023 - Wiley Online Library
Infectious diseases are a major burden in aquaculture, and represent a significant yield‐
limiting factor in production that is costly to manage as well as a potential vector for …

[HTML][HTML] Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection

M Fallet, C Montagnani, B Petton, L Dantan… - Microbiome, 2022 - Springer
Background The interaction of organisms with their surrounding microbial communities
influences many biological processes, a notable example of which is the shaping of the …

[HTML][HTML] A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)

JA Rasmussen, KR Villumsen, M Ernst, M Hansen… - Microbiome, 2022 - Springer
Background Animal protein production is increasingly looking towards microbiome-
associated services such as the design of new and better probiotic solutions to further …