Genomic targets of nuclear estrogen receptors

R O'Lone, MC Frith, EK Karlsson… - Molecular …, 2004 - academic.oup.com
Estrogen influences the physiology of many target tissues in both women and men. The long-
term effects of estrogen are mediated predominantly by nuclear estrogen receptors (ERs) …

[HTML][HTML] ATF3, a hub of the cellular adaptive-response network, in the pathogenesis of diseases: is modulation of inflammation a unifying component?

T Hai, CC Wolford, YS Chang - Gene expression, 2010 - ncbi.nlm.nih.gov
Abstract Activating transcription factor 3 (ATF3) gene encodes a member of the ATF family of
transcription factors and is induced by various stress signals. All members of this family …

Molecular signatures underlying neurofibrillary tangle susceptibility in Alzheimer's disease

M Otero-Garcia, SU Mahajani, D Wakhloo, W Tang… - Neuron, 2022 - cell.com
Tau aggregation in neurofibrillary tangles (NFTs) is closely associated with
neurodegeneration and cognitive decline in Alzheimer's disease (AD). However, the …

[HTML][HTML] Microglial brain region− dependent diversity and selective regional sensitivities to aging

K Grabert, T Michoel, MH Karavolos, S Clohisey… - Nature …, 2016 - nature.com
Microglia have critical roles in neural development, homeostasis and neuroinflammation
and are increasingly implicated in age-related neurological dysfunction. Neurodegeneration …

[HTML][HTML] iRegulon: from a gene list to a gene regulatory network using large motif and track collections

R Janky, A Verfaillie, H Imrichová… - PLoS computational …, 2014 - journals.plos.org
Identifying master regulators of biological processes and mapping their downstream gene
networks are key challenges in systems biology. We developed a computational method …

[HTML][HTML] Integrative functional genomic analyses implicate specific molecular pathways and circuits in autism

NN Parikshak, R Luo, A Zhang, H Won, JK Lowe… - Cell, 2013 - cell.com
Genetic studies have identified dozens of autism spectrum disorder (ASD) susceptibility
genes, raising two critical questions:(1) do these genetic loci converge on specific biological …

[HTML][HTML] A systems-level analysis of the peripheral nerve intrinsic axonal growth program

V Chandran, G Coppola, H Nawabi, T Omura… - Neuron, 2016 - cell.com
The regenerative capacity of the injured CNS in adult mammals is severely limited, yet
axons in the peripheral nervous system (PNS) regrow, albeit to a limited extent, after injury …

[HTML][HTML] Latent enhancers activated by stimulation in differentiated cells

R Ostuni, V Piccolo, I Barozzi, S Polletti, A Termanini… - Cell, 2013 - cell.com
According to current models, once the cell has reached terminal differentiation, the enhancer
repertoire is completely established and maintained by cooperatively acting lineage-specific …

[HTML][HTML] Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells

J Wang, G Xie, M Singh, AT Ghanbarian, T Raskó… - Nature, 2014 - nature.com
Naive embryonic stem cells hold great promise for research and therapeutics as they have
broad and robust developmental potential. While such cells are readily derived from mouse …

[HTML][HTML] The little skate genome and the evolutionary emergence of wing-like fins

F Marlétaz, E de la Calle-Mustienes, RD Acemel… - Nature, 2023 - nature.com
Skates are cartilaginous fish whose body plan features enlarged wing-like pectoral fins,
enabling them to thrive in benthic environments,. However, the molecular underpinnings of …