Phage diversity, genomics and phylogeny

MB Dion, F Oechslin, S Moineau - Nature Reviews Microbiology, 2020 - nature.com
Recent advances in viral metagenomics have enabled the rapid discovery of an
unprecedented catalogue of phages in numerous environments, from the human gut to the …

Tara Oceans: towards global ocean ecosystems biology

S Sunagawa, SG Acinas, P Bork, C Bowler… - Nature Reviews …, 2020 - nature.com
A planetary-scale understanding of the ocean ecosystem, particularly in light of climate
change, is crucial. Here, we review the work of Tara Oceans, an international …

Coupling effects of nitrate reduction and sulfur oxidation in a subtropical marine mangrove ecosystem with Spartina alterniflora invasion

S Nie, S Mo, T Gao, B Yan, P Shen, M Kashif… - Science of The Total …, 2023 - Elsevier
The mangrove ecosystem has a high nitrate reduction capacity, which significantly alleviates
severe nitrogen pollution. However, current research on nitrate reduction mechanisms in the …

Major restructuring of marine plankton assemblages under global warming

F Benedetti, M Vogt, UH Elizondo, D Righetti… - Nature …, 2021 - nature.com
Marine phytoplankton and zooplankton form the basis of the ocean's food-web, yet the
impacts of climate change on their biodiversity are poorly understood. Here, we use an …

Lagrangian ocean analysis: Fundamentals and practices

E Van Sebille, SM Griffies, R Abernathey, TP Adams… - Ocean modelling, 2018 - Elsevier
Lagrangian analysis is a powerful way to analyse the output of ocean circulation models and
other ocean velocity data such as from altimetry. In the Lagrangian approach, large sets of …

Altimetry for the future: Building on 25 years of progress

S Abdalla, AA Kolahchi, M Ablain, S Adusumilli… - Advances in Space …, 2021 - Elsevier
In 2018 we celebrated 25 years of development of radar altimetry, and the progress
achieved by this methodology in the fields of global and coastal oceanography, hydrology …

Insights into global diatom distribution and diversity in the world's ocean

S Malviya, E Scalco, S Audic… - Proceedings of the …, 2016 - National Acad Sciences
Diatoms (Bacillariophyta) constitute one of the most diverse and ecologically important
groups of phytoplankton. They are considered to be particularly important in nutrient-rich …

Determinants of community structure in the global plankton interactome

G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin… - Science, 2015 - science.org
Species interaction networks are shaped by abiotic and biotic factors. Here, as part of the
Tara Oceans project, we studied the photic zone interactome using environmental factors …

Diversity and ecological footprint of Global Ocean RNA viruses

G Dominguez-Huerta, AA Zayed, JM Wainaina, J Guo… - Science, 2022 - science.org
DNA viruses are increasingly recognized as influencing marine microbes and microbe-
mediated biogeochemical cycling. However, little is known about global marine RNA virus …

Structure and function of the global ocean microbiome

S Sunagawa, LP Coelho, S Chaffron, JR Kultima… - Science, 2015 - science.org
Microbes are dominant drivers of biogeochemical processes, yet drawing a global picture of
functional diversity, microbial community structure, and their ecological determinants …