An outlook on the current challenges and opportunities in DNA data storage

MH Raza, S Desai, S Aravamudhan, R Zadegan - Biotechnology Advances, 2023 - Elsevier
Silicon is the gold standard for information storage systems. The exponential generation of
digital information will exhaust the global supply of refined silicon. Therefore, investing in …

MARPPI: boosting prediction of protein–protein interactions with multi-scale architecture residual network

X Li, P Han, W Chen, C Gao, S Wang… - Briefings in …, 2023 - academic.oup.com
Protein–protein interactions (PPIs) are a major component of the cellular biochemical
reaction network. Rich sequence information and machine learning techniques reduce the …

Efficient data reconstruction: The bottleneck of large-scale application of DNA storage

B Cao, Y Zheng, Q Shao, Z Liu, L Xie, Y Zhao, B Wang… - Cell Reports, 2024 - cell.com
Over the past decade, the rapid development of DNA synthesis and sequencing
technologies has enabled preliminary use of DNA molecules for digital data storage …

FMG: An observable DNA storage coding method based on frequency matrix game graphs

B Cao, P Shi, Y Zheng, Q Zhang - Computers in Biology and Medicine, 2022 - Elsevier
Using complex biomolecules for storage is a new carbon-based storage method. For
example, DNA has the potential to be a good method for archival long-term data storage …

[HTML][HTML] BO-DNA: Biologically optimized encoding model for a highly-reliable DNA data storage

A Rasool, J Hong, Q Jiang, H Chen, Q Qu - Computers in Biology and …, 2023 - Elsevier
DNA data storage is a promising technology that utilizes computer simulation, and synthetic
biology, offering high-density and reliable digital information storage. It is challenging to …

GCNSA: DNA storage encoding with a graph convolutional network and self-attention

B Cao, B Wang, Q Zhang - Iscience, 2023 - cell.com
DNA Encoding, as a key step in DNA storage, plays an important role in reading and writing
accuracy and the storage error rate. However, currently, the encoding efficiency is not high …

PETrans: De novo drug design with protein-specific encoding based on transfer learning

X Wang, C Gao, P Han, X Li, W Chen… - International Journal of …, 2023 - mdpi.com
Recent years have seen tremendous success in the design of novel drug molecules through
deep generative models. Nevertheless, existing methods only generate drug-like molecules …

A mixed reality-based navigation method for dental implant navigation method: a pilot study

L Liu, X Wang, M Guan, Y Fan, Z Yang, D Li… - Computers in Biology …, 2023 - Elsevier
This in vitro study aimed to put forward the development and investigation of a novel Mixed
Reality (MR)-based dental implant navigation method and evaluate implant accuracy. Data …

Evolutionary approach to construct robust codes for DNA-based data storage

A Rasool, Q Jiang, Y Wang, X Huang, Q Qu… - Frontiers in …, 2023 - frontiersin.org
DNA is a practical storage medium with high density, durability, and capacity to
accommodate exponentially growing data volumes. A DNA sequence structure is a …

DNMG: Deep molecular generative model by fusion of 3D information for de novo drug design

T Song, Y Ren, S Wang, P Han, L Wang, X Li… - Methods, 2023 - Elsevier
Deep learning is improving and changing the process of de novo molecular design at a
rapid pace. In recent years, great progress has been made in drug discovery and …