Chronological Incongruences between Mitochondrial and Nuclear Phylogenies of Aedes Mosquitoes

N Zadra, A Rizzoli, O Rota-Stabelli - Life, 2021 - mdpi.com
One-third of all mosquitoes belong to the Aedini, a tribe comprising common vectors of viral
zoonoses such as Aedes aegypti and Aedes albopictus. To improve our understanding of …

Insights into synonymous codon usage bias in hepatitis C virus and its adaptation to hosts

R Khandia, AA Khan, N Karuvantevida, P Gurjar… - Pathogens, 2023 - mdpi.com
Hepatitis C virus (HCV) is enveloped RNA virus, encoding for a polyprotein that is processed
by cellular proteases. The virus is responsible for liver cirrhosis, allograft rejection, and …

Genetic and evolutionary analysis of emerging HoBi-like pestivirus

Z Guo, L Wang, L Niu, H Shangguan, C Huang… - Research in Veterinary …, 2021 - Elsevier
HoBi-like pestivirus, an emerging species within the Pestivirus genus, is an important
pathogen associated with a variety of clinical manifestations of ruminants, especially cattle …

A comparative genomics-based study of positive strand RNA viruses emphasizing on SARS-CoV-2 utilizing dinucleotide signature, codon usage and codon context …

J Saha, S Bhattacharjee, MP Sarkar, BK Saha… - Gene reports, 2021 - Elsevier
The novel corona virus disease or COVID-19 caused by a positive strand RNA virus (PRV)
called SARS-CoV-2 is plaguing the entire planet as we conduct this study. In this study a …

Genomewide comparative analysis of codon usage bias in three sequenced Jatropha curcas

Z Wang, G Wang, Q Cai, Y Jiang, C Wang, H Xia… - Journal of Genetics, 2021 - Springer
Jatropha curcas has recently emerged as an important bioenergy plant which is an ideal
alternative for fossil fuels. It is particularly significant to analyse the codon usage bias (CUB) …

Phylogeny and evolution of SARS-CoV-2 during Delta and Omicron variant waves in India

UB Singh, S Deb, L Rani, R Gupta… - Journal of …, 2024 - Taylor & Francis
SARS-CoV-2 evolution has continued to generate variants, responsible for new pandemic
waves locally and globally. Varying disease presentation and severity has been ascribed to …

SARS-CoV-2 Omicron variant wave in India: advent, phylogeny and evolution

UB Singh, S Deb, R Chaudhry, K Bala, L Rani, R Gupta… - bioRxiv, 2022 - biorxiv.org
SARS-CoV-2 evolution has continued to generate variants, responsible for new pandemic
waves locally and globally. Varying disease presentation and severity has been ascribed to …

Genome-scaled molecular clock studies of invasive mosquitoes and other organisms of societal relevance

N Zadra - 2022 - iris.unitn.it
Molecular dating (or molecular clock) is a powerful technique that uses the mutation rate of
biomolecules to estimate divergence times among organisms. In the last two decades, the …