Targeting HER3 to overcome EGFR TKI resistance in NSCLC

Q Chen, G Jia, X Zhang, W Ma - Frontiers in Immunology, 2024 - frontiersin.org
Receptor tyrosine kinases (RTKs) play a crucial role in cellular signaling and oncogenic
progression. Epidermal growth factor receptor tyrosine kinase inhibitors (EGFR TKIs) have …

Prediction of cancer driver genes and mutations: the potential of integrative computational frameworks

M Nourbakhsh, K Degn, A Saksager… - Briefings in …, 2024 - academic.oup.com
The vast amount of available sequencing data allows the scientific community to explore
different genetic alterations that may drive cancer or favor cancer progression. Software …

Responsive Nd-MOF nanorods based near-infrared photoelectrochemical cytosensor and real-time monitoring HClO releasing from cells and tumor

R Zha, H Liang, Y Zong, L Chen, X Chen… - Sensors and Actuators B …, 2024 - Elsevier
Designing functionalized MOFs with specific reactivity and NIR photoelectrochemical and
fluorescent response is critical for developing biosensing systems. Herein, SCy7, a …

[HTML][HTML] DNA polymerase ε and δ variants drive mutagenesis in polypurine tracts in human tumors

D Ostroverkhova, K Tyryshkin, AK Beach, EA Moore… - Cell reports, 2024 - cell.com
Alterations in the exonuclease domain of DNA polymerase ε cause ultramutated cancers.
These cancers accumulate AGA> ATA transversions; however, their genomic features …

[HTML][HTML] Uncovering the subtype-specific disease module and the development of drug response prediction models for glioma

S Munquad, AB Das - Heliyon, 2024 - cell.com
The poor prognosis of glioma patients brought attention to the need for effective therapeutic
approaches for precision therapy. Here, we deployed algorithms relying on network …

ASM variants in the spotlight: A structure-based atlas for unraveling pathogenic mechanisms in lysosomal acid sphingomyelinase

S Scrima, M Lambrughi, M Tiberti, E Fadda… - … et Biophysica Acta (BBA …, 2024 - Elsevier
Lysosomal acid sphingomyelinase (ASM), a critical enzyme in lipid metabolism encoded by
the SMPD1 gene, plays a crucial role in sphingomyelin hydrolysis in lysosomes. ASM …

CIBRA identifies genomic alterations with a system-wide impact on tumor biology

S Lakbir, C Buranelli, GA Meijer, J Heringa… - …, 2024 - academic.oup.com
Motivation Genomic instability is a hallmark of cancer, leading to many somatic alterations.
Identifying which alterations have a system-wide impact is a challenging task. Nevertheless …

Early detection of molecular residual disease and risk stratification for children with acute myeloid leukemia via circulating tumor DNA

LP Liu, SY Zong, AL Zhang, YY Ren, BQ Qi… - Clinical Cancer …, 2024 - AACR
Purpose: Patient-tailored minimal residual disease (MRD) monitoring based on circulating
tumor DNA (ctDNA) sequencing of leukemia-specific mutations enables early detection of …

AQcalc: A web server that identifies weak molecular interactions in protein structures

M Afshinpour, LA Smith, S Chakravarty - Protein Science, 2023 - Wiley Online Library
Weak molecular interactions play an important role in protein structure and function.
Computational tools that identify weak molecular interactions are, therefore, valuable for the …

Enhancing Nanomaterial-Based Optical Spectroscopic Detection of Cancer through Machine Learning

C Sahli, Kenry - ACS Materials Letters, 2024 - ACS Publications
Optical spectroscopic techniques relying on light–matter interactions, such as Raman
scattering, fluorescence, and infrared absorbance spectroscopy, offer numerous advantages …