Supporting in situ conservation of the genetic diversity of crop wild relatives using genomic technologies

PW Wambugu, R Henry - Molecular Ecology, 2022 - Wiley Online Library
The last decade has witnessed huge technological advances in genomics, particularly in
DNA sequencing. Here, we review the actual and potential application of genomics in …

Regulation of root secondary metabolites by partial root‐associated microbiotas under the shaping of licorice ecotypic differentiation in northwest China

Y Liu, H Wang, Z Peng, D Li, W Chen… - Journal of Integrative …, 2021 - Wiley Online Library
Interactions between plant hosts and their microbiotas are becoming increasingly evident,
while the effects of plant communities on microbial communities in different geographic …

Data‐driven guidelines for phylogenomic analyses using SNP data

JS Suissa, GY De La Cerda, LC Graber… - Applications in Plant …, 2024 - Wiley Online Library
Premise There is a general lack of consensus on the best practices for filtering of single‐
nucleotide polymorphisms (SNPs) and whether it is better to use SNPs or include flanking …

Nutritional improvement in soybean (Glycine max (L.) Merrill) through plant breeding and biotechnological interventions

V Kumari, R Thakur, J Kumari, A Kumari… - Crop and Pasture …, 2023 - CSIRO Publishing
Soybean has been grown as an important protein and oil crop for thousands of years.
Additionally, it also has a high content of iso-flavonoids, folic acid and saponins, exhibiting …

[HTML][HTML] Comparative Analysis of the Mitochondrial Genome Sequences of Diaporthe longicolla (syn. Phomopsis longicolla) Isolates Causing Phomopsis Seed …

S Li, X Hu, Q Song - Journal of Fungi, 2024 - mdpi.com
Diaporthe longicolla (syn. Phomopsis longicolla) is an important seed-borne fungal
pathogen and the primary cause of Phomopsis seed decay (PSD) in soybean. PSD is one of …

A review of the de novo domestication and cultivation of edible Australian native plants as food crops

NA George, R Coorey, K Dixon… - The Journal of Agricultural …, 2024 - cambridge.org
Australia has a diverse and unique native flora with thousands of edible plant taxa, many of
which are wild relatives of important food crops. These have the potential to diversify and …

Comparative phylogenomic analyses of SNP versus full locus datasets: insights and recommendations for researchers

JS Suissa, GY De La Cerda, LC Graber, C Jelley… - bioRxiv, 2023 - biorxiv.org
Premise In phylogenomic analyses, no consensus exists on whether using single nucleotide
polymorphisms (SNPs) or including flanking regions (full 'locus') is best, nor how strictly …

[HTML][HTML] Evaluation of perennial Glycine species for response to Meloidogyne incognita, Rotylenchulus reniformis, and Pratylenchus penetrans

J Han, SP Locke, TK Herman, NE Schroeder… - Journal of …, 2022 - ncbi.nlm.nih.gov
Abstract Root-knot (Meloidogyne incognita (Kofoid & White) Chitwood), reniform
(Rotylenchulus reniformis Lindford & Oliveira), and lesion nematodes (Pratylenchus …

Evaluation of perennial species for response to, and

J Han, SP Locke, TK Herman, NE Schroeder… - Journal of …, 2021 - sciendo.com
Abstract Root-knot (Meloidogyne incognita (Kofoid & White) Chitwood), reniform
(Rotylenchulus reniformis Lindford & Oliveira), and lesion nematodes (Pratylenchus …

A New Model of Genetic Variation and Evolution Evaluates Relative Impacts of Background Selections and Selective Sweeps

X Gu - bioRxiv, 2020 - biorxiv.org
Intra-population genetic variation and interspecies divergence in chromosome regions can
be considerably affected by different local recombination rates. There are two models:(i) the …