Prokaryotic taxonomy and nomenclature in the age of big sequence data
The classification of life forms into a hierarchical system (taxonomy) and the application of
names to this hierarchy (nomenclature) is at a turning point in microbiology. The …
names to this hierarchy (nomenclature) is at a turning point in microbiology. The …
The Phylogeny, Biodiversity, and Ecology of the Chloroflexi in Activated Sludge
LBM Speirs, DTF Rice, S Petrovski… - Frontiers in …, 2019 - frontiersin.org
It is now clear that several of the filamentous bacteria in activated sludge wastewater
treatment plants globally, are members of the phylum Chloroflexi. They appear to be more …
treatment plants globally, are members of the phylum Chloroflexi. They appear to be more …
MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants
Microbial communities are responsible for biological wastewater treatment, but our
knowledge of their diversity and function is still poor. Here, we sequence more than 5 million …
knowledge of their diversity and function is still poor. Here, we sequence more than 5 million …
Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing
Microorganisms play crucial roles in water recycling, pollution removal and resource
recovery in the wastewater industry. The structure of these microbial communities is …
recovery in the wastewater industry. The structure of these microbial communities is …
Global diversity and biogeography of bacterial communities in wastewater treatment plants
Microorganisms in wastewater treatment plants (WWTPs) are essential for water purification
to protect public and environmental health. However, the diversity of microorganisms and …
to protect public and environmental health. However, the diversity of microorganisms and …
[HTML][HTML] MiDAS 3: an ecosystem-specific reference database, taxonomy and knowledge platform for activated sludge and anaerobic digesters reveals species-level …
The function of the microbiomes in wastewater treatment systems and anaerobic digesters is
dictated by the physiological activity of their members and complex interactions between …
dictated by the physiological activity of their members and complex interactions between …
“Candidatus Dechloromonas phosphoritropha” and “Ca. D. phosphorivorans”, novel polyphosphate accumulating organisms abundant in wastewater treatment …
Members of the genus Dechloromonas are often abundant in enhanced biological
phosphorus removal (EBPR) systems and are recognized putative polyphosphate …
phosphorus removal (EBPR) systems and are recognized putative polyphosphate …
Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants
As one of the largest biotechnological applications, activated sludge (AS) systems in
wastewater treatment plants (WWTPs) harbor enormous viruses, with 10-1,000-fold higher …
wastewater treatment plants (WWTPs) harbor enormous viruses, with 10-1,000-fold higher …
MiDAS 5: Global diversity of bacteria and archaea in anaerobic digesters
MKD Dueholm, KS Andersen, AKC Korntved… - Nature …, 2024 - nature.com
Anaerobic digestion of organic waste into methane and carbon dioxide (biogas) is carried
out by complex microbial communities. Here, we use full-length 16S rRNA gene sequencing …
out by complex microbial communities. Here, we use full-length 16S rRNA gene sequencing …
Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics
Short-chain fatty acid (SCFA) degradation is an important process in methanogenic
ecosystems, and is usually catalyzed by SCFA-oxidizing bacteria in syntrophy with …
ecosystems, and is usually catalyzed by SCFA-oxidizing bacteria in syntrophy with …