Meta‐analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment

F Keck, RC Blackman, R Bossart… - Molecular …, 2022 - Wiley Online Library
DNA metabarcoding is increasingly used for the assessment of aquatic communities, and
numerous studies have investigated the consistency of this technique with traditional …

[图书][B] A practical guide to DNA-based methods for biodiversity assessment.

K Bruce, RC Blackman, SJ Bourlat, M Hellström… - 2021 - repository.oceanbestpractices.org
This book represents a synthesis of knowledge and best practice in the field of DNA-based
biomonitoring at the time of writing. It has been written with end-users of molecular tools in …

Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses

F Keck, M Couton, F Altermatt - Molecular Ecology Resources, 2023 - Wiley Online Library
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental
DNA sampling, is becoming increasingly relevant in ecology, biodiversity sciences and …

DNA metabarcoding methods for the study of marine benthic meiofauna: A review

R Gielings, M Fais, D Fontaneto, S Creer… - Frontiers in Marine …, 2021 - frontiersin.org
Meiofaunal animals, roughly between 0.045 and 1 mm in size, are ubiquitous and
ecologically important inhabitants of benthic marine ecosystems. Their high species …

Advances in nematode identification: A journey from fundamentals to evolutionary aspects

KA Bhat, RA Mir, A Farooq, M Manzoor, A Hami… - Diversity, 2022 - mdpi.com
Nematodes are non-segmented roundworms evenly distributed with various habitats
ranging to approximately every ecological extremity. These are the least studied organisms …

Comparing diversity levels in environmental samples: DNA sequence capture and metabarcoding approaches using 18S and COI genes

H Giebner, K Langen, SJ Bourlat… - Molecular Ecology …, 2020 - Wiley Online Library
Environmental DNA studies targeting multiple taxa using metabarcoding provide remarkable
insights into levels of species diversity in any habitat. The main drawbacks are the presence …

Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna

JN Macher, A Martínez, S Çakir… - Molecular Ecology …, 2024 - Wiley Online Library
Molecular techniques like metabarcoding, while promising for exploring diversity of
communities, are often impeded by the lack of reference DNA sequences available for …

Comparison of morphological, DNA barcoding, and metabarcoding characterizations of freshwater nematode communities

J Schenk, N Kleinbölting… - Ecology and …, 2020 - Wiley Online Library
Biomonitoring approaches and investigations of many ecological questions require
assessments of the biodiversity of a given habitat. Small organisms, ranging from …

Status and prospects of marine NIS detection and monitoring through (e) DNA metabarcoding

S Duarte, PE Vieira, AS Lavrador, FO Costa - Science of the Total …, 2021 - Elsevier
In coastal ecosystems, non-indigenous species (NIS) are recognized as a major threat to
biodiversity, ecosystem functioning and socio-economic activities. Here we present a …

Integration of DNA-based approaches in aquatic ecological assessment using benthic macroinvertebrates

S Duarte, BR Leite, MJ Feio, FO Costa, AF Filipe - Water, 2021 - mdpi.com
Benthic macroinvertebrates are among the most used biological quality elements for
assessing the condition of all types of aquatic ecosystems worldwide (ie, fresh water …