[HTML][HTML] Targeting RNA structures with small molecules

JL Childs-Disney, X Yang, QMR Gibaut… - Nature Reviews Drug …, 2022 - nature.com
RNA adopts 3D structures that confer varied functional roles in human biology and
dysfunction in disease. Approaches to therapeutically target RNA structures with small …

RNA structural dynamics as captured by molecular simulations: a comprehensive overview

J Sponer, G Bussi, M Krepl, P Banáš, S Bottaro… - Chemical …, 2018 - ACS Publications
With both catalytic and genetic functions, ribonucleic acid (RNA) is perhaps the most
pluripotent chemical species in molecular biology, and its functions are intimately linked to …

A hierarchy of timescales in protein dynamics is linked to enzyme catalysis

KA Henzler-Wildman, M Lei, V Thai, SJ Kerns… - Nature, 2007 - nature.com
The synergy between structure and dynamics is essential to the function of biological
macromolecules. Thermally driven dynamics on different timescales have been …

An NMR view of protein dynamics in health and disease

A Sekhar, LE Kay - Annual review of biophysics, 2019 - annualreviews.org
Biological molecules are often highly dynamic, and this flexibility can be critical for function.
The large range of sampled timescales and the fact that many of the conformers that are …

Structural determinants and mechanism of HIV-1 genome packaging

K Lu, X Heng, MF Summers - Journal of molecular biology, 2011 - Elsevier
Like all retroviruses, the human immunodeficiency virus selectively packages two copies of
its unspliced RNA genome, both of which are utilized for strand-transfer-mediated …

Discovery of selective bioactive small molecules by targeting an RNA dynamic ensemble

AC Stelzer, AT Frank, JD Kratz, MD Swanson… - Nature chemical …, 2011 - nature.com
Current approaches used to identify protein-binding small molecules are not suited for
identifying small molecules that can bind emerging RNA drug targets. By docking small …

Observing biological dynamics at atomic resolution using NMR

AK Mittermaier, LE Kay - Trends in biochemical sciences, 2009 - cell.com
Biological macromolecules are highly flexible and continually undergo conformational
fluctuations on a broad spectrum of timescales. It has long been recognized that dynamics …

NMR approaches for structural analysis of multidomain proteins and complexes in solution

C Göbl, T Madl, B Simon, M Sattler - Progress in Nuclear Magnetic …, 2014 - Elsevier
NMR spectroscopy is a key method for studying the structure and dynamics of (large)
multidomain proteins and complexes in solution. It plays a unique role in integrated …

Hierarchy of RNA functional dynamics

AM Mustoe, CL Brooks… - Annual review of …, 2014 - annualreviews.org
RNA dynamics play a fundamental role in many cellular functions. However, there is no
general framework to describe these complex processes, which typically consist of many …

How does it really move? Recent progress in the investigation of protein nanosecond dynamics by NMR and simulation

O Stenström, C Champion, M Lehner… - Current Opinion in …, 2022 - Elsevier
Nuclear magnetic resonance (NMR) spin relaxation experiments currently probe molecular
motions on timescales from picoseconds to nanoseconds. The detailed interpretation of …