A guide to designing photocontrol in proteins: methods, strategies and applications
AC Kneuttinger - Biological Chemistry, 2022 - degruyter.com
Light is essential for various biochemical processes in all domains of life. In its presence
certain proteins inside a cell are excited, which either stimulates or inhibits subsequent …
certain proteins inside a cell are excited, which either stimulates or inhibits subsequent …
Genetically encoded crosslinkers to address protein–protein interactions
Noncanonical amino acids (ncAAs) for photo‐and chemical crosslinking are powerful
biochemical tools for studying and manipulating interactions between proteins both in vitro …
biochemical tools for studying and manipulating interactions between proteins both in vitro …
Beyond the marks: reader-effectors as drivers of epigenetics and chromatin engineering
Chromatin is a system of proteins and DNA that regulates chromosome organization and
gene expression in eukaryotes. Essential features that support these processes include …
gene expression in eukaryotes. Essential features that support these processes include …
Photo-cross-linking to delineate epigenetic interactome
Covalent modifications of DNA and histones are key cellular epigenetic marks to regulate
gene functions. Most of these epigenetic marks are added or removed by corresponding …
gene functions. Most of these epigenetic marks are added or removed by corresponding …
A diazirine's central carbon is sp 2-hybridized, facilitating conjugation to dye molecules
L Michelini, T Slaney, S Virk, E Rafic, LC Qie… - Chemical …, 2025 - pubs.rsc.org
Diazirines are versatile carbene precursors that are extensively used in biological target
identification experiments. However, their photo-activation wavelength (ca. 365 nm) …
identification experiments. However, their photo-activation wavelength (ca. 365 nm) …
Opportunity knocks for uncovering the new function of an understudied nucleosome remodeling complex member, the bromodomain PHD finger transcription factor …
H Zahid, NM Olson, WCK Pomerantz - Current opinion in chemical biology, 2021 - Elsevier
Nucleosome remodeling provides access to genomic DNA for recruitment of the
transcriptional machinery to mediate gene expression. The aberrant function of nucleosome …
transcriptional machinery to mediate gene expression. The aberrant function of nucleosome …
Engineering a methyllysine reader with photoactive amino acid in mammalian cells
S Arora, S Sappa, K Hinkelman, K Islam - Chemical Communications, 2020 - pubs.rsc.org
Methyllysine sites in proteins are recognized by an array of reader domains that mediate
protein–protein interactions for controlling cellular processes. Herein, we engineer a …
protein–protein interactions for controlling cellular processes. Herein, we engineer a …
Hydrophobic cavity-directed azide-acetyllysine photochemistry for profiling non-histone interacting partners of bromodomain protein 1
J Kuwik, S Wagner, B Sudhamalla, R Debiec… - RSC Chemical …, 2022 - pubs.rsc.org
Bromodomain containing protein 1 (BRD1) plays critical roles in chromatin acetylation, gene
transcription, erythropoiesis, and brain development. BRD1 is also implicated in several …
transcription, erythropoiesis, and brain development. BRD1 is also implicated in several …
Rational design, production and in vitro analysis of photoxenoproteins
C Hiefinger, S Mandl, M Wieland, A Kneuttinger - Methods in Enzymology, 2023 - Elsevier
In synthetic biology, the artificial control of proteins by light is of growing interest since it
enables the spatio-temporal regulation of downstream molecular processes. This precise …
enables the spatio-temporal regulation of downstream molecular processes. This precise …
Development of a single culture E. coli expression system for the enzymatic synthesis of fluorinated tyrosine and its incorporation into proteins
NM Olson, JA Johnson, KE Peterson… - Journal of fluorine …, 2022 - Elsevier
Current experiments that rely on biosynthetic metabolic protein labeling with 19 F often
require fluorinated amino acids, which in the case of 2-and 3-fluorotyrosine can be …
require fluorinated amino acids, which in the case of 2-and 3-fluorotyrosine can be …