Ultraviolet photodissociation mass spectrometry for analysis of biological molecules

JS Brodbelt, LJ Morrison, I Santos - Chemical reviews, 2019 - ACS Publications
The development of new ion-activation/dissociation methods continues to be one of the most
active areas of mass spectrometry owing to the broad applications of tandem mass …

Illuminating the dark phosphoproteome

EJ Needham, BL Parker, T Burykin, DE James… - Science …, 2019 - science.org
Protein phosphorylation is a major regulator of protein function and biological outcomes.
This was first recognized through functional biochemical experiments, and in the past …

The diverse and expanding role of mass spectrometry in structural and molecular biology

P Lössl, M van de Waterbeemd, AJR Heck - The EMBO journal, 2016 - embopress.org
The emergence of proteomics has led to major technological advances in mass
spectrometry (MS). These advancements not only benefitted MS‐based high‐throughput …

Histone interaction landscapes visualized by crosslinking mass spectrometry in intact cell nuclei

D Fasci, H van Ingen, RA Scheltema… - Molecular & Cellular …, 2018 - ASBMB
Cells organize their actions partly through tightly controlled protein-protein interactions—
collectively termed the interactome. Here we use crosslinking mass spectrometry (XL-MS) to …

Phosphopeptide fragmentation and site localization by mass spectrometry: an update

CM Potel, S Lemeer, AJR Heck - Analytical chemistry, 2018 - ACS Publications
Pioneering work by, among others, the groups of Hunt and Mann at the start of this century
opened up the era of mass spectrometry (MS)-based phosphoproteomics. 1− 3 Through …

Instrumentation at the leading edge of proteomics

TM Peters-Clarke, JJ Coon, NM Riley - Analytical Chemistry, 2024 - ACS Publications
The proteome, or collection of proteoforms expressed in a biological system, is dynamic and
heterogeneous. As our appreciation for the complexity of the proteome has evolved, so have …

Detailed structural characterization of sphingolipids via 193 nm ultraviolet photodissociation and ultra high resolution tandem mass spectrometry

E Ryan, CQN Nguyen, C Shiea… - Journal of The American …, 2017 - ACS Publications
Sphingolipids serve not only as components of cellular membranes but also as bioactive
mediators of numerous cellular functions. As the biological activities of these lipids are …

Applications of infrared multiple photon dissociation (IRMPD) to the detection of posttranslational modifications

P Maitre, D Scuderi, D Corinti, B Chiavarino… - Chemical …, 2019 - ACS Publications
Infrared multiple photon dissociation (IRMPD) spectroscopy allows for the derivation of the
vibrational fingerprint of molecular ions under tandem mass spectrometry (MS/MS) …

Sequencing grade tandem mass spectrometry for top–down proteomics using hybrid electron capture dissociation methods in a benchtop Orbitrap mass spectrometer

JB Shaw, N Malhan, YV Vasil'ev, NI Lopez… - Analytical …, 2018 - ACS Publications
Compared to traditional collision induced dissociation methods, electron capture
dissociation (ECD) provides more comprehensive characterization of large peptides and …

Top-“Double-Down” Mass Spectrometry of Histone H4 Proteoforms: Tandem Ultraviolet-Photon and Mobility/Mass-Selected Electron Capture Dissociations

K Jeanne Dit Fouque, SA Miller, K Pham… - Analytical …, 2022 - ACS Publications
Post-translational modifications (PTMs) on intact histones play a major role in regulating
chromatin dynamics and influence biological processes such as DNA transcription …