[HTML][HTML] A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA

KH Kjær, M Winther Pedersen, B De Sanctis… - Nature, 2022 - nature.com
Abstract Late Pliocene and Early Pleistocene epochs 3.6 to 0.8 million years ago had
climates resembling those forecasted under future warming. Palaeoclimatic records show …

SEED 2: a user-friendly platform for amplicon high-throughput sequencing data analyses

T Větrovský, P Baldrian, D Morais - Bioinformatics, 2018 - academic.oup.com
Motivation Modern molecular methods have increased our ability to describe microbial
communities. Along with the advances brought by new sequencing technologies, we now …

[HTML][HTML] Comparative analysis estimates the relative frequencies of co-divergence and cross-species transmission within viral families

JL Geoghegan, S Duchêne, EC Holmes - PLoS pathogens, 2017 - journals.plos.org
The cross-species transmission of viruses from one host species to another is responsible
for the majority of emerging infections. However, it is unclear whether some virus families …

Transcriptional profiling of Bulinus globosus provides insights into immune gene families in snails supporting the transmission of urogenital schistosomiasis

L Bu, MR Habib, L Lu, MW Mutuku, ES Loker… - Developmental & …, 2024 - Elsevier
Schistosomiasis, urogenital and intestinal, afflicts 251 million people worldwide with
approximately two-thirds of the patients suffering from the urogenital form of the disease …

Isolation and characterization of a distinct influenza A virus from Egyptian bats

A Kandeil, MR Gomaa, MM Shehata… - Journal of …, 2019 - Am Soc Microbiol
Recently, two genetically distinct influenza viruses were detected in bats in Guatemala and
Peru. We conducted influenza A virus surveillance among four bat species in Egypt. Out of …

[HTML][HTML] Clostridium difficile exosporium cysteine-rich proteins are essential for the morphogenesis of the exosporium layer, spore resistance, and affect C. difficile …

P Calderón-Romero, P Castro-Córdova… - PLoS …, 2018 - journals.plos.org
Clostridium difficile is a Gram-positive spore-former bacterium and the leading cause of
nosocomial antibiotic-associated diarrhea that can culminate in fatal colitis. During the …

[HTML][HTML] In-Depth Genomic and Phenotypic Characterization of the Antarctic Psychrotolerant Strain Pseudomonas sp. MPC6 Reveals Unique Metabolic Features …

M Orellana-Saez, N Pacheco, JI Costa… - Frontiers in …, 2019 - frontiersin.org
We obtained the complete genome sequence of the psychrotolerant extremophile
Pseudomonas sp. MPC6, a natural Polyhydroxyalkanoates (PHAs) producing bacterium …

[HTML][HTML] The impact of migratory flyways on the spread of avian influenza virus in North America

M Fourment, AE Darling, EC Holmes - BMC evolutionary biology, 2017 - Springer
Background Wild birds are the major reservoir hosts for influenza A viruses (AIVs) and have
been implicated in the emergence of pandemic events in livestock and human populations …

[HTML][HTML] Characterization and genomic analysis of two novel psychrotolerant Acidithiobacillus ferrooxidans strains from polar and subpolar environments

C Muñoz-Villagrán, J Grossolli-Gálvez… - Frontiers in …, 2022 - frontiersin.org
The bioleaching process is carried out by aerobic acidophilic iron-oxidizing bacteria that are
mainly mesophilic or moderately thermophilic. However, many mining sites are located in …

Novel and extendable genotyping system for human respiratory syncytial virus based on wholegenome sequence analysis

J Chen, X Qiu, V Avadhanula… - Influenza and Other …, 2022 - Wiley Online Library
Background Human respiratory syncytial virus (RSV) is one of the leading causes of
respiratory infections, especially in infants and young children. Previous RSV sequencing …