Whole-genome sequencing of bacterial pathogens: the future of nosocomial outbreak analysis
Outbreaks of multidrug-resistant bacteria present a frequent threat to vulnerable patient
populations in hospitals around the world. Intensive care unit (ICU) patients are particularly …
populations in hospitals around the world. Intensive care unit (ICU) patients are particularly …
[HTML][HTML] Vancomycin-resistant Enterococcus faecium and the emergence of new sequence types associated with hospital infection
RF O'Toole, KWC Leong, V Cumming… - Research in …, 2023 - Elsevier
Enterococcus faecium is a major species in infections by vancomycin-resistant enterococci
(VRE). New variants of the pathogen have emerged and become dominant in healthcare …
(VRE). New variants of the pathogen have emerged and become dominant in healthcare …
Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study
LJ Pankhurst, C del Ojo Elias, AA Votintseva… - The Lancet …, 2016 - thelancet.com
Background Slow and cumbersome laboratory diagnostics for Mycobacterium tuberculosis
complex (MTBC) risk delayed treatment and poor patient outcomes. Whole-genome …
complex (MTBC) risk delayed treatment and poor patient outcomes. Whole-genome …
Artificial Intelligence and Machine learning based prediction of resistant and susceptible mutations in Mycobacterium tuberculosis
Tuberculosis (TB), an infectious disease caused by Mycobacterium tuberculosis (M. tb),
causes highest number of deaths globally for any bacterial disease necessitating novel …
causes highest number of deaths globally for any bacterial disease necessitating novel …
Clinical value of whole-genome sequencing of Mycobacterium tuberculosis
HE Takiff, O Feo - The Lancet Infectious Diseases, 2015 - thelancet.com
Whole-genome sequencing (WGS) is now common as a result of new technologies that can
rapidly sequence a complete bacterial genome for US $500 or less. Many studies have …
rapidly sequence a complete bacterial genome for US $500 or less. Many studies have …
[HTML][HTML] 全基因组测序与生物信息学分析在细菌耐药性研究中的应用
沈应博， 史晓敏， 沈建忠， 汪洋， 王少林 - 生物工程学报, 2019 - cjb.ijournals.cn
随着耐药细菌的大量出现及广泛传播, 细菌耐药性成为全球备受关注的问题.
耐药细菌的特征如耐药基因, 毒力因子, 质粒分型等以及不同菌株间亲缘关系对于细菌耐药性 …
耐药细菌的特征如耐药基因, 毒力因子, 质粒分型等以及不同菌株间亲缘关系对于细菌耐药性 …
Molecular epidemiology of cattle tuberculosis in Mexico through whole-genome sequencing and spoligotyping
CA Perea Razo, E Rodriguez Hernandez, SIR Ponce… - PLoS …, 2018 - journals.plos.org
Mycobacterium bovis infection in cattle persists in Mexico, posing a threat to human health.
Control of bovine tuberculosis, through the National Program Against Bovine Tuberculosis …
Control of bovine tuberculosis, through the National Program Against Bovine Tuberculosis …
A bioinformatics pipeline for Mycobacterium tuberculosis sequencing that cleans contaminant reads from sputum samples
B Cuevas-Córdoba, C Fresno, JI Haase-Hernández… - PLoS …, 2021 - journals.plos.org
Next-Generation Sequencing (NGS) is widely used to investigate genomic variation. In
several studies, the genetic variation of Mycobacterium tuberculosis has been analyzed in …
several studies, the genetic variation of Mycobacterium tuberculosis has been analyzed in …
Artificial intelligence and metagenomics in intestinal diseases
Gut microbiota has been shown to associate with the development of gastrointestinal
diseases. In the last decade, development in whole metagenome sequencing and 16S …
diseases. In the last decade, development in whole metagenome sequencing and 16S …
Lineage classification and antitubercular drug resistance surveillance of Mycobacterium tuberculosis by whole-genome sequencing in Southern India
Whole-genome sequencing has created a revolution in tuberculosis management by
providing a comprehensive picture of the various genetic polymorphisms with …
providing a comprehensive picture of the various genetic polymorphisms with …