A guide for the diagnosis of rare and undiagnosed disease: beyond the exome

S Marwaha, JW Knowles, EA Ashley - Genome medicine, 2022 - Springer
Rare diseases affect 30 million people in the USA and more than 300–400 million
worldwide, often causing chronic illness, disability, and premature death. Traditional …

Exploiting machine learning for end-to-end drug discovery and development

S Ekins, AC Puhl, KM Zorn, TR Lane, DP Russo… - Nature materials, 2019 - nature.com
A variety of machine learning methods such as naive Bayesian, support vector machines
and more recently deep neural networks are demonstrating their utility for drug discovery …

The DisGeNET knowledge platform for disease genomics: 2019 update

J Piñero, JM Ramírez-Anguita… - Nucleic acids …, 2020 - academic.oup.com
One of the most pressing challenges in genomic medicine is to understand the role played
by genetic variation in health and disease. Thanks to the exploration of genomic variants at …

[HTML][HTML] Estimating cumulative point prevalence of rare diseases: analysis of the Orphanet database

S Nguengang Wakap, DM Lambert, A Olry… - European Journal of …, 2020 - nature.com
Rare diseases, an emerging global public health priority, require an evidence-based
estimate of the global point prevalence to inform public policy. We used the publicly …

OMIM. org: leveraging knowledge across phenotype–gene relationships

JS Amberger, CA Bocchini, AF Scott… - Nucleic acids …, 2019 - academic.oup.com
Abstract For over 50 years Mendelian Inheritance in Man has chronicled the collective
knowledge of the field of medical genetics. It initially cataloged the known X-linked …

DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants

J Piñero, À Bravo, N Queralt-Rosinach… - Nucleic acids …, 2016 - academic.oup.com
The information about the genetic basis of human diseases lies at the heart of precision
medicine and drug discovery. However, to realize its full potential to support these goals …

Why digital medicine depends on interoperability

M Lehne, J Sass, A Essenwanger, J Schepers… - NPJ digital …, 2019 - nature.com
Digital data are anticipated to transform medicine. However, most of today's medical data
lack interoperability: hidden in isolated databases, incompatible systems and proprietary …

ClinVar: public archive of interpretations of clinically relevant variants

MJ Landrum, JM Lee, M Benson, G Brown… - Nucleic acids …, 2016 - academic.oup.com
Abstract ClinVar (https://www. ncbi. nlm. nih. gov/clinvar/) at the National Center for
Biotechnology Information (NCBI) is a freely available archive for interpretations of clinical …

SymMap: an integrative database of traditional Chinese medicine enhanced by symptom mapping

Y Wu, F Zhang, K Yang, S Fang, D Bu, H Li… - Nucleic acids …, 2019 - academic.oup.com
Recently, the pharmaceutical industry has heavily emphasized phenotypic drug discovery
(PDD), which relies primarily on knowledge about phenotype changes associated with …

The human phenotype ontology in 2017

S Köhler, NA Vasilevsky, M Engelstad… - Nucleic acids …, 2017 - academic.oup.com
Deep phenotyping has been defined as the precise and comprehensive analysis of
phenotypic abnormalities in which the individual components of the phenotype are observed …