[HTML][HTML] Computational analyses of mechanism of action (MoA): data, methods and integration

MA Trapotsi, L Hosseini-Gerami, A Bender - RSC chemical biology, 2022 - pubs.rsc.org
The elucidation of a compound's Mechanism of Action (MoA) is a challenging task in the
drug discovery process, but it is important in order to rationalise phenotypic findings and to …

[HTML][HTML] Building a knowledge graph to enable precision medicine

P Chandak, K Huang, M Zitnik - Scientific Data, 2023 - nature.com
Developing personalized diagnostic strategies and targeted treatments requires a deep
understanding of disease biology and the ability to dissect the relationship between …

[HTML][HTML] Computer vision and IoT research landscape for health and safety management on construction sites

S Arshad, O Akinade, S Bello, M Bilal - Journal of Building Engineering, 2023 - Elsevier
Aims Perform a systematic review of current literature to evaluate and summarise the health
and safety hazards on construction sites. Methods Science Direct, SCOPUS and web of …

[HTML][HTML] AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination

TC Terwilliger, D Liebschner, TI Croll, CJ Williams… - Nature …, 2024 - nature.com
Artificial intelligence-based protein structure prediction methods such as AlphaFold have
revolutionized structural biology. The accuracies of these predictions vary, however, and …

Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19

MGP van der Wijst, SE Vazquez… - Science translational …, 2021 - science.org
Neutralizing autoantibodies against type I interferons (IFNs) have been found in some
patients with critical coronavirus disease 2019 (COVID-19), the disease caused by severe …

An in vitro model of early anteroposterior organization during human development

N Moris, K Anlas, SC van den Brink, A Alemany… - Nature, 2020 - nature.com
The body plan of the mammalian embryo is shaped through the process of gastrulation, an
early developmental event that transforms an isotropic group of cells into an ensemble of …

[HTML][HTML] An activity-guided map of electrophile-cysteine interactions in primary human T cells

EV Vinogradova, X Zhang, D Remillard, DC Lazar… - Cell, 2020 - cell.com
Electrophilic compounds originating from nature or chemical synthesis have profound effects
on immune cells. These compounds are thought to act by cysteine modification to alter the …

[HTML][HTML] Generative modeling of brain maps with spatial autocorrelation

JB Burt, M Helmer, M Shinn, A Anticevic, JD Murray - NeuroImage, 2020 - Elsevier
Studies of large-scale brain organization have revealed interesting relationships between
spatial gradients in brain maps across multiple modalities. Evaluating the significance of …

[HTML][HTML] Defining the condensate landscape of fusion oncoproteins

S Tripathi, HK Shirnekhi, SD Gorman… - Nature …, 2023 - nature.com
Fusion oncoproteins (FOs) arise from chromosomal translocations in~ 17% of cancers and
are often oncogenic drivers. Although some FOs can promote oncogenesis by undergoing …

[HTML][HTML] Generation of mature compact ventricular cardiomyocytes from human pluripotent stem cells

S Funakoshi, I Fernandes, O Mastikhina… - Nature …, 2021 - nature.com
Compact cardiomyocytes that make up the ventricular wall of the adult heart represent an
important therapeutic target population for modeling and treating cardiovascular diseases …