Functional long non-coding RNAs evolve from junk transcripts
AF Palazzo, EV Koonin - Cell, 2020 - cell.com
Transcriptome studies reveal pervasive transcription of complex genomes, such as those of
mammals. Despite popular arguments for functionality of most, if not all, of these transcripts …
mammals. Despite popular arguments for functionality of most, if not all, of these transcripts …
Origins and evolution of CRISPR-Cas systems
EV Koonin, KS Makarova - Philosophical Transactions of …, 2019 - royalsocietypublishing.org
CRISPR-Cas, the bacterial and archaeal adaptive immunity systems, encompass a complex
machinery that integrates fragments of foreign nucleic acids, mostly from mobile genetic …
machinery that integrates fragments of foreign nucleic acids, mostly from mobile genetic …
Pentatricopeptide repeat proteins in plants
Pentatricopeptide repeat (PPR) proteins constitute one of the largest protein families in land
plants, with more than 400 members in most species. Over the past decade, much has been …
plants, with more than 400 members in most species. Over the past decade, much has been …
Plant organellar RNA maturation
Plant organellar RNA metabolism is run by a multitude of nucleus-encoded RNA-binding
proteins (RBPs) that control RNA stability, processing, and degradation. In chloroplasts and …
proteins (RBPs) that control RNA stability, processing, and degradation. In chloroplasts and …
[HTML][HTML] A hydrophobic ratchet entrenches molecular complexes
Most proteins assemble into multisubunit complexes. The persistence of these complexes
across evolutionary time is usually explained as the result of natural selection for functional …
across evolutionary time is usually explained as the result of natural selection for functional …
Structure of the yeast mitochondrial large ribosomal subunit
Mitochondria have specialized ribosomes that have diverged from their bacterial and
cytoplasmic counterparts. We have solved the structure of the yeast mitoribosomal large …
cytoplasmic counterparts. We have solved the structure of the yeast mitoribosomal large …
Mitochondrial and plastid genome architecture: reoccurring themes, but significant differences at the extremes
DR Smith, PJ Keeling - Proceedings of the National …, 2015 - National Acad Sciences
Mitochondrial and plastid genomes show a wide array of architectures, varying immensely in
size, structure, and content. Some organelle DNAs have even developed elaborate …
size, structure, and content. Some organelle DNAs have even developed elaborate …
Is junk DNA bunk? A critique of ENCODE
WF Doolittle - Proceedings of the National Academy of …, 2013 - National Acad Sciences
Do data from the Encyclopedia Of DNA Elements (ENCODE) project render the notion of
junk DNA obsolete? Here, I review older arguments for junk grounded in the C-value …
junk DNA obsolete? Here, I review older arguments for junk grounded in the C-value …
[图书][B] The logic of chance: the nature and origin of biological evolution
EV Koonin - 2011 - books.google.com
The Logic of Chance offers a reappraisal and a new synthesis of theories, concepts, and
hypotheses on the key aspects of the evolution of life on earth in light of comparative …
hypotheses on the key aspects of the evolution of life on earth in light of comparative …
The on‐again, off‐again relationship between mitochondrial genomes and species boundaries
The study of reproductive isolation and species barriers frequently focuses on mitochondrial
genomes and has produced two alternative and almost diametrically opposed narratives. On …
genomes and has produced two alternative and almost diametrically opposed narratives. On …