Evolutionary informatics: unifying knowledge about the diversity of life

CS Parr, R Guralnick, N Cellinese… - Trends in ecology & …, 2012 - cell.com
The accelerating growth of data and knowledge in evolutionary biology is indisputable.
Despite this rapid progress, information remains scattered, poorly documented and in …

A survey on provenance: What for? What form? What from?

M Herschel, R Diestelkämper, H Ben Lahmar - The VLDB Journal, 2017 - Springer
Provenance refers to any information describing the production process of an end product,
which can be anything from a piece of digital data to a physical object. While this survey …

Scientific workflows: Past, present and future

M Atkinson, S Gesing, J Montagnat, I Taylor - Future Generation Computer …, 2017 - Elsevier
This special issue and our editorial celebrate 10 years of progress with data-intensive or
scientific workflows. There have been very substantial advances in the representation of …

Scientific workflows: Business as usual?

B Ludäscher, M Weske, T McPhillips… - … Process Management: 7th …, 2009 - Springer
Business workflow management and business process modeling are mature research
areas, whose roots go far back to the early days of office automation systems. Scientific …

Workflows and extensions to the Kepler scientific workflow system to support environmental sensor data access and analysis

D Barseghian, I Altintas, MB Jones, D Crawl… - Ecological …, 2010 - Elsevier
Environmental sensor networks are now commonly being deployed within environmental
observatories and as components of smaller-scale ecological and environmental …

[PDF][PDF] Techniques for efficiently querying scientific workflow provenance graphs.

MK Anand, S Bowers, B Ludäscher - EDBT, 2010 - cs.gonzaga.edu
ABSTRACT A key advantage of scientific workflow systems over traditional scripting
approaches is their ability to automatically record data and process dependencies …

Prospective and retrospective provenance collection in scientific workflow environments

C Lim, S Lu, A Chebotko… - 2010 IEEE International …, 2010 - ieeexplore.ieee.org
Provenance, a record of the derivation history of scientific results, is critical for scientific
workflows to support reproducibility, result interpretation, and problem diagnosis. Both …

[PDF][PDF] Scientific Process Automation and Workflow Management.

B Ludäscher, I Altintas, S Bowers… - Scientific Data …, 2009 - ndl.ethernet.edu.et
Scientific discoveries in the natural sciences are increasingly data driven and
computationally intensive, providing unprecedented data analysis and scientific simulation …

Efficient provenance storage over nested data collections

MK Anand, S Bowers, T McPhillips… - Proceedings of the 12th …, 2009 - dl.acm.org
Scientific workflow systems are increasingly used to automate complex data analyses,
largely due to their benefits over traditional approaches for workflow design, optimization …

User-level workflow design

AL Lamprecht - Lecture Notes in Computer Science, 2013 - Springer
This book addresses the challenge of user-level workflow design with a particular focus on
the bioinformatics application domain. Towards this aim, it follows a novel, constraint-driven …