Molecular cybernetics: challenges toward cellular chemical artificial intelligence

S Murata, T Toyota, SM Nomura… - Advanced Functional …, 2022 - Wiley Online Library
Research on so‐called “chemical artificial intelligence”(CAI) is an emerging field with the
aim of constructing information‐processing systems with learning capabilities based on …

DNA strand displacement based computational systems and their applications

C Chen, J Wen, Z Wen, S Song, X Shi - Frontiers in Genetics, 2023 - frontiersin.org
DNA computing has become the focus of computing research due to its excellent parallel
processing capability, data storage capacity, and low energy consumption characteristics …

Liquid metal electrodynamic accumulation microfluidics system for DNA memory and liquid biopsy

Y Jeong, S Noh, M Yu, S Chang, H Eun… - Advanced Functional …, 2023 - Wiley Online Library
This study presents a liquid metal electrodynamic accumulation microfluidic (LEAM) device
that effectively controls DNA dynamics using liquid metal (LM) electrodes and an applied …

pH-Controlled Resettable Modular DNA Strand-Displacement Circuits

X Sun, D Yao, H Liang - Nano Letters, 2023 - ACS Publications
Sophisticated dynamic molecular systems with diverse functions have been fabricated by
using the fundamental tool of toehold-mediated strand displacement (TMSD) in the field of …

Using strand displacing polymerase to program chemical reaction networks

S Shah, J Wee, T Song, L Ceze, K Strauss… - Journal of the …, 2020 - ACS Publications
Chemical reaction networks (CRNs) provide a powerful abstraction to formally represent
complex biochemical processes. DNA provides a promising substrate to implement the …

Renewable Time‐Responsive DNA Circuits

S Garg, S Shah, H Bui, T Song, R Mokhtar, J Reif - Small, 2018 - Wiley Online Library
DNA devices have been shown to be capable of evaluating Boolean logic. Several robust
designs for DNA circuits have been demonstrated. Some prior DNA‐based circuits are use …

Programming the sequential release of DNA

D Scalise, M Rubanov, K Miller, L Potters… - ACS Synthetic …, 2020 - ACS Publications
This study presents a mechanism for releasing a series of different short DNA sequences
from sequestered complexes, one after another, using coupled biochemical reactions. The …

Programming temporal DNA barcodes for single-molecule fingerprinting

S Shah, AK Dubey, J Reif - Nano letters, 2019 - ACS Publications
Fluorescence microscopy enables simultaneous observation of the dynamics of single
molecules in a large region of interest. Most traditional techniques employ either the …

Research progress in construction and application of enzyme-based DNA logic gates

J Liu, S Liu, C Zou, S Xu, C Zhou - IEEE Transactions on …, 2022 - ieeexplore.ieee.org
As a research hotspot in the field of information processing, DNA computing exhibits several
important underlying characteristics—from parallel computing and low energy consumption …

Leak-resilient enzyme-free nucleic acid dynamical systems through shadow cancellation

RT Nagipogu, JH Reif - Journal of the Royal Society …, 2024 - royalsocietypublishing.org
DNA strand displacement (DSD) emerged as a prominent reaction motif for engineering
nucleic acid-based computational devices with programmable behaviours. However, strand …