G-quadruplexes at telomeres: friend or foe?

TM Bryan - Molecules, 2020 - mdpi.com
Telomeres are DNA-protein complexes that cap and protect the ends of linear
chromosomes. In almost all species, telomeric DNA has a G/C strand bias, and the short …

TRF1 and TRF2 use different mechanisms to find telomeric DNA but share a novel mechanism to search for protein partners at telomeres

J Lin, P Countryman, N Buncher, P Kaur… - Nucleic acids …, 2014 - academic.oup.com
Human telomeres are maintained by the shelterin protein complex in which TRF1 and TRF2
bind directly to duplex telomeric DNA. How these proteins find telomeric sequences among …

DNA polymerase δ stalls on telomeric lagging strand templates independently from G-quadruplex formation

JD Lormand, N Buncher, CT Murphy… - Nucleic acids …, 2013 - academic.oup.com
Previous evidence indicates that telomeres resemble common fragile sites and present a
challenge for DNA replication. The precise impediments to replication fork progression at …

The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes

D Beseiso, EV Chen, SE McCarthy… - Nucleic Acids …, 2022 - academic.oup.com
G-quadruplexes (GQs) are non-canonical DNA structures composed of stacks of stabilized G-
tetrads. GQs play an important role in a variety of biological processes and may form at …

Werner syndrome protein suppresses the formation of large deletions during the replication of human telomeric sequences

RR Damerla, KE Knickelbein, S Strutt, FJ Liu, H Wang… - Cell cycle, 2012 - Taylor & Francis
Werner syndrome (WS) is a disorder characterized by features of premature aging and
increased cancer that is caused by loss of the RecQ helicase WRN. Telomeres consisting of …

Distance-dependent duplex DNA destabilization proximal to G-quadruplex/ i -motif sequences

SLB König, JL Huppert, RKO Sigel… - Nucleic acids …, 2013 - academic.oup.com
G-quadruplexes and i-motifs are complementary examples of non-canonical nucleic acid
substructure conformations. G-quadruplex thermodynamic stability has been extensively …

[HTML][HTML] Homoiterons and expansion in ribosomal RNAs

MS Parker, FR Sallee, EA Park, SL Parker - FEBS Open Bio, 2015 - Elsevier
Ribosomal RNAs in both prokaryotes and eukaryotes feature numerous repeats of three or
more nucleotides with the same nucleobase (homoiterons). In prokaryotes these repeats are …

Interstitial telomeric repeats-associated DNA breaks

O Shubernetskaya, D Skvortsov, S Evfratov… - Nucleus, 2017 - Taylor & Francis
During a cell's lifespan, DNA break formation is a common event, associated with many
processes, from replication to apoptosis. Most of DNA breaks are readily repaired, but some …

GGGCTA repeats can fold into hairpins poorly unfolded by replication protein A: a possible origin of the length-dependent instability of GGGCTA variant repeats in …

J Chatain, A Blond, AT Phan, C Saintomé… - Nucleic Acids …, 2021 - academic.oup.com
Human telomeres are composed of GGGTTA repeats and interspersed with variant repeats.
The GGGCTA variant motif was identified in the proximal regions of human telomeres about …

G and C Iterons and Strings in MicroRNAs Should be Important in Regulation of mRNAs

MS Parker, EA Park, FR Sallee, SL Parker - Microrna, 2015 - ingentaconnect.com
Background: Same-nucleotide repeats (iterons) are strongly expressed in many DNA
regions and RNA classes. These repeats serve importantly in association of polynucleotides …