Chromatin remodeling factors regulate environmental stress responses in plants
ZT Song, JX Liu, JJ Han - Journal of Integrative Plant Biology, 2021 - Wiley Online Library
Environmental stress from climate change and agricultural activity threatens global plant
biodiversity as well as crop yield and quality. As sessile organisms, plants must maintain the …
biodiversity as well as crop yield and quality. As sessile organisms, plants must maintain the …
The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
Sorghum bicolor is a drought tolerant C4 grass used for the production of grain, forage,
sugar, and lignocellulosic biomass and a genetic model for C4 grasses due to its relatively …
sugar, and lignocellulosic biomass and a genetic model for C4 grasses due to its relatively …
MaizeGDB update: new tools, data and interface for the maize model organism database
CM Andorf, EK Cannon, JL Portwood… - Nucleic acids …, 2016 - academic.oup.com
MaizeGDB is a highly curated, community-oriented database and informatics service to
researchers focused on the crop plant and model organism Zea mays ssp. mays. Although …
researchers focused on the crop plant and model organism Zea mays ssp. mays. Although …
Accessible DNA and relative depletion of H3K9me2 at maize loci undergoing RNA-directed DNA methylation
RNA-directed DNA methylation (RdDM) in plants is a well-characterized example of RNA
interference-related transcriptional gene silencing. To determine the relationships between …
interference-related transcriptional gene silencing. To determine the relationships between …
ISWI proteins participate in the genome‐wide nucleosome distribution in Arabidopsis
Chromatin is a highly organized structure with repetitive nucleosome subunits. Nucleosome
distribution patterns, which contain information on epigenetic controls, are dynamically …
distribution patterns, which contain information on epigenetic controls, are dynamically …
Advances in understanding cis regulation of the plant gene with an emphasis on comparative genomics
DG Burgess, J Xu, M Freeling - Current opinion in plant biology, 2015 - Elsevier
Highlights•Chromatin accessibility and chromatin looping dynamically regulate
transcription.•Transcription factor binding is not equal to transcription factor function.•The …
transcription.•Transcription factor binding is not equal to transcription factor function.•The …
Differential nuclease sensitivity profiling of chromatin reveals biochemical footprints coupled to gene expression and functional DNA elements in maize
DL Vera, TF Madzima, JD Labonne, MP Alam… - The Plant …, 2014 - academic.oup.com
The eukaryotic genome is organized into nucleosomes, the fundamental units of chromatin.
The positions of nucleosomes on DNA regulate protein-DNA interactions and in turn …
The positions of nucleosomes on DNA regulate protein-DNA interactions and in turn …
Determinants of nucleosome positioning and their influence on plant gene expression
Nucleosome positioning influences the access of transcription factors (TFs) to their binding
sites and gene expression. Studies in plant, animal, and fungal models demonstrate similar …
sites and gene expression. Studies in plant, animal, and fungal models demonstrate similar …
A dynamic meiotic SUN belt includes the zygotene-stage telomere bouquet and is disrupted in chromosome segregation mutants of maize (Zea mays L.)
The nuclear envelope (NE) plays an essential role in meiotic telomere behavior and links
the cytoplasm and nucleoplasm during homologous chromosome pairing and …
the cytoplasm and nucleoplasm during homologous chromosome pairing and …
The chromatin remodeler ZmCHB101 impacts expression of osmotic stress-responsive genes in maize
Key message The maize chromatin remodeler ZmCHB101 plays an essential role in the
osmotic stress response. ZmCHB101 controls nucleosome densities around transcription …
osmotic stress response. ZmCHB101 controls nucleosome densities around transcription …