Distance-based support vector machine to predict DNA N6-methyladenine modification

H Zhang, Q Zou, Y Ju, C Song, D Chen - Current Bioinformatics, 2022 - ingentaconnect.com
Background: DNA N6-methyladenine plays an important role in the restriction-modification
system to isolate invasion from adventive DNA. The shortcomings of the high time …

Research progress in predicting DNA methylation modifications and the relation with human diseases

C Ao, L Gao, L Yu - Current Medicinal Chemistry, 2022 - ingentaconnect.com
DNA methylation is an important mode of regulation in epigenetic mechanisms, and it is one
of the research foci in the field of epigenetics. DNA methylation modification affects a series …

Critical evaluation of web-based DNA N6-methyladenine site prediction tools

MM Hasan, W Shoombuatong, H Kurata… - Briefings in …, 2021 - academic.oup.com
Methylation of DNA N6-methyladenosine (6mA) is a type of epigenetic modification that
plays pivotal roles in various biological processes. The accurate genome-wide identification …

Deep transformers and convolutional neural network in identifying DNA N6-methyladenine sites in cross-species genomes

NQK Le, QT Ho - Methods, 2022 - Elsevier
As one of the most common post-transcriptional epigenetic modifications, N6-methyladenine
(6 mA), plays an essential role in various cellular processes and disease pathogenesis …

Meta-i6mA: an interspecies predictor for identifying DNA N6-methyladenine sites of plant genomes by exploiting informative features in an integrative machine …

MM Hasan, S Basith, MS Khatun, G Lee… - Briefings in …, 2021 - academic.oup.com
Abstract DNA N 6-methyladenine (6mA) represents important epigenetic modifications,
which are responsible for various cellular processes. The accurate identification of 6mA sites …

SDM6A: a web-based integrative machine-learning framework for predicting 6mA sites in the rice genome

S Basith, B Manavalan, TH Shin, G Lee - Molecular Therapy-Nucleic Acids, 2019 - cell.com
DNA N 6-adenine methylation (6mA) is an epigenetic modification in prokaryotes and
eukaryotes. Identifying 6mA sites in rice genome is important in rice epigenetics and …

iN6-Methyl (5-step): Identifying RNA N6-methyladenosine sites using deep learning mode via Chou's 5-step rules and Chou's general PseKNC

I Nazari, M Tahir, H Tayara, KT Chong - Chemometrics and Intelligent …, 2019 - Elsevier
Abstract N6-methyladenosine (m 6 A) is an RNA methylation modification and it is involved
in various biological progresses such as translation, alternative splicing, degradation …

A convolutional neural network using dinucleotide one-hot encoder for identifying DNA N6-methyladenine sites in the rice genome

Z Lv, H Ding, L Wang, Q Zou - Neurocomputing, 2021 - Elsevier
Abstract N6-methyladenine (m 6 A) is one of the crucial epigenetic modifications and is
related to the control of various DNA processes. Carrying out a genome-wide m 6 A analysis …

SNNRice6mA: a deep learning method for predicting DNA N6-methyladenine sites in rice genome

H Yu, Z Dai - Frontiers in genetics, 2019 - frontiersin.org
DNA N6-methyladenine (6mA) is an important epigenetic modification, which is involved in
many biology regulation processes. An accurate and reliable method for 6mA identification …

A CNN-based RNA N6-methyladenosine site predictor for multiple species using heterogeneous features representation

W Alam, SD Ali, H Tayara, K to Chong - IEEE Access, 2020 - ieeexplore.ieee.org
Post-transcriptional modification such as N6-methyladenosine (m6A) has a crucial role in
the stability and regulation of gene expression. Therefore, the identification of m6A is highly …