[HTML][HTML] Genomics of evolutionary novelty in hybrids and polyploids

G Nieto Feliner, J Casacuberta, JF Wendel - Frontiers in genetics, 2020 - frontiersin.org
It has long been recognized that hybridization and polyploidy are prominent processes in
plant evolution. Although classically recognized as significant in speciation and adaptation …

Evolution of plant NLRs: from natural history to precise modifications

J Tamborski, KV Krasileva - Annual review of plant biology, 2020 - annualreviews.org
Nucleotide-binding leucine-rich repeat receptors (NLRs) monitor the plant intracellular
environment for signs of pathogen infection. Several mechanisms of NLR-mediated …

Revealing evolution of tropane alkaloid biosynthesis by analyzing two genomes in the Solanaceae family

F Zhang, F Qiu, J Zeng, Z Xu, Y Tang, T Zhao… - Nature …, 2023 - nature.com
Tropane alkaloids (TAs) are widely distributed in the Solanaceae, while some important
medicinal tropane alkaloids (mTAs), such as hyoscyamine and scopolamine, are restricted …

Global range expansion history of pepper (Capsicum spp.) revealed by over 10,000 genebank accessions

P Tripodi, MT Rabanus-Wallace… - Proceedings of the …, 2021 - National Acad Sciences
Genebanks collect and preserve vast collections of plants and detailed passport information,
with the aim of preserving genetic diversity for conservation and breeding. Genetic …

Extrachromosomal circular DNA and structural variants highlight genome instability in Arabidopsis epigenetic mutants

P Zhang, A Mbodj, A Soundiramourtty, C Llauro… - Nature …, 2023 - nature.com
Abundant extrachromosomal circular DNA (eccDNA) is associated with transposable
element (TE) activity. However, how the eccDNA compartment is controlled by epigenetic …

The 3D architecture of the pepper genome and its relationship to function and evolution

Y Liao, J Wang, Z Zhu, Y Liu, J Chen, Y Zhou… - Nature …, 2022 - nature.com
The organization of chromatin into self-interacting domains is universal among eukaryotic
genomes, though how and why they form varies considerably. Here we report a …

Improved genome assembly and pan‐genome provide key insights into eggplant domestication and breeding

L Barchi, MT Rabanus‐Wallace, J Prohens… - The Plant …, 2021 - Wiley Online Library
Eggplant (Solanum melongena L.) is an important horticultural crop and one of the most
widely grown vegetables from the Solanaceae family. It was domesticated from a wild …

[PDF][PDF] Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding

Y Wu, D Li, Y Hu, H Li, GP Ramstein, S Zhou, X Zhang… - Cell, 2023 - cell.com
Hybrid potato breeding will transform the crop from a clonally propagated tetraploid to a
seed-reproducing diploid. Historical accumulation of deleterious mutations in potato …

Wolfberry genomes and the evolution of Lycium (Solanaceae)

YL Cao, Y Li, YF Fan, Z Li, K Yoshida, JY Wang… - Communications …, 2021 - nature.com
Wolfberry Lycium, an economically important genus of the Solanaceae family, contains
approximately 80 species and shows a fragmented distribution pattern among the Northern …

[HTML][HTML] Challenges and strategies for breeding resistance in Capsicum annuum to the multifarious pathogen, Phytophthora capsici

DW Barchenger, KH Lamour, PW Bosland - Frontiers in plant science, 2018 - frontiersin.org
Phytophthora capsici is the most devastating pathogen for chile pepper production
worldwide and current management strategies are not effective. The population structure of …