Dragging ras back in the ring
AG Stephen, D Esposito, RK Bagni, F McCormick - Cancer cell, 2014 - cell.com
Ras proteins play a major role in human cancers but have not yielded to therapeutic attack.
Ras-driven cancers are among the most difficult to treat and often excluded from therapies …
Ras-driven cancers are among the most difficult to treat and often excluded from therapies …
Ras conformational ensembles, allostery, and signaling
Ras proteins are classical members of small GTPases that function as molecular switches by
alternating between inactive GDP-bound and active GTP-bound states. Ras activation is …
alternating between inactive GDP-bound and active GTP-bound states. Ras activation is …
Excited-state observation of active K-Ras reveals differential structural dynamics of wild-type versus oncogenic G12D and G12C mutants
Despite the prominent role of the K-Ras protein in many different types of human cancer,
major gaps in atomic-level information severely limit our understanding of its functions in …
major gaps in atomic-level information severely limit our understanding of its functions in …
Insights into protein–protein binding by binding free energy calculation and free energy decomposition for the Ras–Raf and Ras–RalGDS complexes
Absolute binding free energy calculations and free energy decompositions are presented for
the protein–protein complexes H-Ras/C-Raf1 and H-Ras/RalGDS. Ras is a central switch in …
the protein–protein complexes H-Ras/C-Raf1 and H-Ras/RalGDS. Ras is a central switch in …
Converging free energy estimates: MM‐PB (GB) SA studies on the protein–protein complex Ras–Raf
Estimating protein–protein interaction energies is a very challenging task for current
simulation protocols. Here, absolute binding free energies are reported for the complex H …
simulation protocols. Here, absolute binding free energies are reported for the complex H …
GTP-state-selective cyclic peptide ligands of K-Ras (G12D) block its interaction with Raf
We report the identification of three cyclic peptide ligands of K-Ras (G12D) using an
integrated in vitro translation–mRNA display selection platform. These cyclic peptides show …
integrated in vitro translation–mRNA display selection platform. These cyclic peptides show …
Increasing complexity of Ras signaling
The initial discovery that ras genes endowed retroviruses with potent carcinogenic
properties and the subsequent determination that mutated ras genes were present in a wide …
properties and the subsequent determination that mutated ras genes were present in a wide …
Small-molecule modulation of Ras signaling
J Spiegel, PM Cromm, G Zimmermann… - Nature chemical …, 2014 - nature.com
Despite intense efforts in pharmaceutical industry and academia, a therapeutic grip on
oncogenic Ras proteins has remained elusive. Mutated Ras is associated with∼ 20− 30% of …
oncogenic Ras proteins has remained elusive. Mutated Ras is associated with∼ 20− 30% of …
Folding and binding cascades: dynamic landscapes and population shifts
Whereas previously we have successfully utilized the folding funnels concept to rationalize
binding mechanisms (Ma B, Kumar S, Tsai CJ, Nussinov R, 1999, Protein Eng 12: 713–720) …
binding mechanisms (Ma B, Kumar S, Tsai CJ, Nussinov R, 1999, Protein Eng 12: 713–720) …
Oncogenic and RASopathy-associated K-RAS mutations relieve membrane-dependent occlusion of the effector-binding site
MT Mazhab-Jafari, CB Marshall… - Proceedings of the …, 2015 - National Acad Sciences
K-RAS4B (Kirsten rat sarcoma viral oncogene homolog 4B) is a prenylated, membrane-
associated GTPase protein that is a critical switch for the propagation of growth factor …
associated GTPase protein that is a critical switch for the propagation of growth factor …