Deciphering molecular interactions by proximity labeling
Many biological processes are executed and regulated through the molecular interactions of
proteins and nucleic acids. Proximity labeling (PL) is a technology for tagging the …
proteins and nucleic acids. Proximity labeling (PL) is a technology for tagging the …
Regulation, functions and transmission of bivalent chromatin during mammalian development
TA Macrae, J Fothergill-Robinson… - … reviews Molecular cell …, 2023 - nature.com
Cells differentiate and progress through development guided by a dynamic chromatin
landscape that mediates gene expression programmes. During development, mammalian …
landscape that mediates gene expression programmes. During development, mammalian …
[HTML][HTML] CLIP and complementary methods
RNA molecules start assembling into ribonucleoprotein (RNP) complexes during
transcription. Dynamic RNP assembly, largely directed by cis-acting elements on the RNA …
transcription. Dynamic RNP assembly, largely directed by cis-acting elements on the RNA …
The dynamic broad epigenetic (H3K4me3, H3K27ac) domain as a mark of essential genes
TH Beacon, GP Delcuve, C López, G Nardocci… - Clinical …, 2021 - Springer
Transcriptionally active chromatin is marked by tri-methylation of histone H3 at lysine 4
(H3K4me3) located after first exons and around transcription start sites. This epigenetic mark …
(H3K4me3) located after first exons and around transcription start sites. This epigenetic mark …
Tracking chromatin state changes using nanoscale photo-proximity labelling
Interactions between biomolecules underlie all cellular processes and ultimately control cell
fate. Perturbation of native interactions through mutation, changes in expression levels or …
fate. Perturbation of native interactions through mutation, changes in expression levels or …
Manipulating cation− π interactions of reader proteins in living cells with genetic code expansion
H Zhao, L Tang, Y Fang, C Liu, W Ding… - Journal of the …, 2023 - ACS Publications
Despite tremendous success in understanding the chemical nature and the importance of
cation− π interactions in a range of biological processes, particularly in epigenetic …
cation− π interactions in a range of biological processes, particularly in epigenetic …
A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution
X Grau-Bové, C Navarrete, C Chiva… - Nature ecology & …, 2022 - nature.com
Histones and associated chromatin proteins have essential functions in eukaryotic genome
organization and regulation. Despite this fundamental role in eukaryotic cell biology, we lack …
organization and regulation. Despite this fundamental role in eukaryotic cell biology, we lack …
Genetically encoded bioorthogonal tryptophan decaging in living cells
Tryptophan (Trp) plays a critical role in the regulation of protein structure, interactions and
functions through its π system and indole N–H group. A generalizable method for blocking …
functions through its π system and indole N–H group. A generalizable method for blocking …
Real-time single-molecule imaging of transcriptional regulatory networks in living cells
Gene regulatory networks drive the specific transcriptional programmes responsible for the
diversification of cell types during the development of multicellular organisms. Although our …
diversification of cell types during the development of multicellular organisms. Although our …
Interrogating epigenetic mechanisms with chemically customized chromatin
Genetic and genomic techniques have proven incredibly powerful for identifying and
studying molecular players implicated in the epigenetic regulation of DNA-templated …
studying molecular players implicated in the epigenetic regulation of DNA-templated …