Decoding post-translational modification crosstalk with proteomics
Post-translational modification (PTM) of proteins allows cells to regulate protein functions,
transduce signals and respond to perturbations. PTMs expand protein functionality and …
transduce signals and respond to perturbations. PTMs expand protein functionality and …
The multifaceted role of EGLN family prolyl hydroxylases in cancer: going beyond HIF regulation
S Strocchi, F Reggiani, G Gobbi, A Ciarrocchi… - Oncogene, 2022 - nature.com
Abstract EGLN1, EGLN2 and EGLN3 are proline hydroxylase whose main function is the
regulation of the HIF factors. They work as oxygen sensors and are the main responsible of …
regulation of the HIF factors. They work as oxygen sensors and are the main responsible of …
Multiphosphorylation-Dependent Recognition of Anti-pS2 Antibodies against RNA Polymerase II C-Terminal Domain Revealed by Chemical Synthesis
E Piemontese, A Herfort… - Journal of the …, 2024 - ACS Publications
Phosphorylation is a major constituent of the CTD code, which describes the set of post-
translational modifications on 52 repeats of a YSPTSPS consensus heptad that orchestrates …
translational modifications on 52 repeats of a YSPTSPS consensus heptad that orchestrates …
Live imaging of transcription sites using an elongating RNA polymerase II–specific probe
In eukaryotic nuclei, most genes are transcribed by RNA polymerase II (RNAP2), whose
regulation is a key to understanding the genome and cell function. RNAP2 has a long …
regulation is a key to understanding the genome and cell function. RNAP2 has a long …
Inherent asymmetry of Rpd3S coordinates its nucleosome engagement and association with elongating RNA polymerase II
Y Pan, M Liu, C Ruan, M Peng, M Hao… - Nature Structural & …, 2025 - nature.com
The Rpd3S histone deacetylase complex has a crucial role in genomic integrity by
deacetylating transcribed nucleosomes following RNA polymerase (Pol) II passage. Cryo …
deacetylating transcribed nucleosomes following RNA polymerase (Pol) II passage. Cryo …
Variation of C-terminal domain governs RNA polymerase II genomic locations and alternative splicing in eukaryotic transcription
The C-terminal domain of RPB1 (CTD) orchestrates transcription by recruiting regulators to
RNA Pol II upon phosphorylation. With CTD driving condensate formation on gene loci, the …
RNA Pol II upon phosphorylation. With CTD driving condensate formation on gene loci, the …
CDK7 kinase activity promotes RNA polymerase II promoter escape by facilitating initiation factor release
T Velychko, E Mohammad, I Ferrer-Vicens, I Parfentev… - Molecular Cell, 2024 - cell.com
Summary Cyclin-dependent kinase 7 (CDK7), part of the general transcription factor TFIIH,
promotes gene transcription by phosphorylating the C-terminal domain of RNA polymerase …
promotes gene transcription by phosphorylating the C-terminal domain of RNA polymerase …
PPICT: an integrated deep neural network for predicting inter-protein PTM cross-talk
F Zhu, L Deng, Y Dai, G Zhang, F Meng… - Briefings in …, 2023 - academic.oup.com
Post-translational modifications (PTMs) fine-tune various signaling pathways not only by the
modification of a single residue, but also by the interplay of different modifications on residue …
modification of a single residue, but also by the interplay of different modifications on residue …
Removing quote marks from the RNA polymerase II CTD 'code'
G Dieci - Biosystems, 2021 - Elsevier
In eukaryotes, RNA polymerase II (Pol II) is responsible for the synthesis of all mRNAs and
myriads of short and long untranslated RNAs, whose fabrication involves close …
myriads of short and long untranslated RNAs, whose fabrication involves close …
The anatomy of transcriptionally active chromatin loops in Drosophila primary spermatocytes using super-resolution microscopy
While the biochemistry of gene transcription has been well studied, our understanding of
how this process is organised in 3D within the intact nucleus is less well understood. Here …
how this process is organised in 3D within the intact nucleus is less well understood. Here …