[HTML][HTML] Aquatic environmental DNA: A review of the macro-organismal biomonitoring revolution
Environmental DNA (eDNA) is the fastest growing biomonitoring tool fuelled by two key
features: time efficiency and sensitivity. Technological advancements allow rapid …
features: time efficiency and sensitivity. Technological advancements allow rapid …
The multiple states of environmental DNA and what is known about their persistence in aquatic environments
Increased use of environmental DNA (eDNA) analysis for indirect species detection has
spurred the need to understand eDNA persistence in the environment. Understanding the …
spurred the need to understand eDNA persistence in the environment. Understanding the …
[图书][B] A practical guide to DNA-based methods for biodiversity assessment.
This book represents a synthesis of knowledge and best practice in the field of DNA-based
biomonitoring at the time of writing. It has been written with end-users of molecular tools in …
biomonitoring at the time of writing. It has been written with end-users of molecular tools in …
MIDORI2: A collection of quality controlled, preformatted, and regularly updated reference databases for taxonomic assignment of eukaryotic mitochondrial sequences
Abstract Analysis of environmental DNA is increasingly used to characterize ecological
communities, but the effectiveness of this approach depends on the accuracy of taxonomic …
communities, but the effectiveness of this approach depends on the accuracy of taxonomic …
[HTML][HTML] To denoise or to cluster, that is not the question: optimizing pipelines for COI metabarcoding and metaphylogeography
Background The recent blooming of metabarcoding applications to biodiversity studies
comes with some relevant methodological debates. One such issue concerns the treatment …
comes with some relevant methodological debates. One such issue concerns the treatment …
Environmental DNA/RNA for pathogen and parasite detection, surveillance, and ecology
Detection of pathogens, parasites, and other symbionts in environmental samples via
eDNA/eRNA (collectively eNA) is an increasingly important source of information about their …
eDNA/eRNA (collectively eNA) is an increasingly important source of information about their …
[HTML][HTML] Environmental DNA methods for ecological monitoring and biodiversity assessment in estuaries
Environmental DNA (eDNA) detection methods can complement traditional biomonitoring to
yield new ecological insights in aquatic systems. However, the conceptual and …
yield new ecological insights in aquatic systems. However, the conceptual and …
Quantitative monitoring of diverse fish communities on a large scale combining eDNA metabarcoding and qPCR
D Pont, P Meulenbroek, V Bammer… - Molecular Ecology …, 2023 - Wiley Online Library
Environmental DNA (eDNA) metabarcoding is an effective method for studying fish
communities but allows only an estimation of relative species abundance (density/biomass) …
communities but allows only an estimation of relative species abundance (density/biomass) …
Quantifying biodiversity using eDNA from water bodies: General principles and recommendations for sampling designs
Reliable and comparable estimates of biodiversity are the foundation for understanding
ecological systems and informing policy and decision‐making, especially in an era of …
ecological systems and informing policy and decision‐making, especially in an era of …
Warm temperature and alkaline conditions accelerate environmental RNA degradation
T Jo, K Tsuri, T Hirohara, H Yamanaka - Environmental DNA, 2023 - Wiley Online Library
Recent developments in environmental DNA (eDNA) analysis allow more rapid and
extensive biomonitoring than traditional capture‐based surveys do. However, detection of …
extensive biomonitoring than traditional capture‐based surveys do. However, detection of …