Microbial diversity in extreme environments

WS Shu, LN Huang - Nature Reviews Microbiology, 2022 - nature.com
A wide array of microorganisms, including many novel, phylogenetically deeply rooted taxa,
survive and thrive in extreme environments. These unique and reduced-complexity …

Mechanisms of viral mutation

R Sanjuán, P Domingo-Calap - Cellular and molecular life sciences, 2016 - Springer
The remarkable capacity of some viruses to adapt to new hosts and environments is highly
dependent on their ability to generate de novo diversity in a short period of time. Rates of …

Molecular and evolutionary determinants of bacteriophage host range

PA de Jonge, FL Nobrega, SJJ Brouns, BE Dutilh - Trends in microbiology, 2019 - cell.com
The host range of a bacteriophage is the taxonomic diversity of hosts it can successfully
infect. Host range, one of the central traits to understand in phages, is determined by a range …

Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations

CJ Castelle, CT Brown, K Anantharaman… - Nature Reviews …, 2018 - nature.com
Candidate phyla radiation (CPR) bacteria and DPANN (an acronym of the names of the first
included phyla) archaea are massive radiations of organisms that are widely distributed …

A compendium of viruses from methanogenic archaea reveals their diversity and adaptations to the gut environment

S Medvedeva, G Borrel, M Krupovic, S Gribaldo - Nature Microbiology, 2023 - nature.com
Methanogenic archaea are major producers of methane, a potent greenhouse gas and
biofuel, and are widespread in diverse environments, including the animal gut. The …

Deep sea sediments associated with cold seeps are a subsurface reservoir of viral diversity

Z Li, D Pan, G Wei, W Pi, C Zhang, JH Wang… - The ISME …, 2021 - academic.oup.com
In marine ecosystems, viruses exert control on the composition and metabolism of microbial
communities, influencing overall biogeochemical cycling. Deep sea sediments associated …

Evolutionary ecology of prokaryotic immune mechanisms

S van Houte, A Buckling, ER Westra - Microbiology and Molecular …, 2016 - Am Soc Microbiol
Bacteria have a range of distinct immune strategies that provide protection against
bacteriophage (phage) infections. While much has been learned about the mechanism of …

Viruses of archaea: structural, functional, environmental and evolutionary genomics

M Krupovic, V Cvirkaite-Krupovic, J Iranzo… - Virus research, 2018 - Elsevier
Viruses of archaea represent one of the most enigmatic parts of the virosphere. Most of the
characterized archaeal viruses infect extremophilic hosts and display remarkable diversity of …

Genomic diversity, lifestyles and evolutionary origins of DPANN archaea

N Dombrowski, JH Lee, TA Williams… - FEMS microbiology …, 2019 - academic.oup.com
Archaea—a primary domain of life besides Bacteria—have for a long time been regarded as
peculiar organisms that play marginal roles in biogeochemical cycles. However, this picture …

The enigmatic archaeal virosphere

D Prangishvili, DH Bamford, P Forterre… - Nature Reviews …, 2017 - nature.com
One of the most prominent features of archaea is the extraordinary diversity of their DNA
viruses. Many archaeal viruses differ substantially in morphology from bacterial and …