Metabolomics: A way forward for crop improvement
Metabolomics is an emerging branch of “omics” and it involves identification and
quantification of metabolites and chemical footprints of cellular regulatory processes in …
quantification of metabolites and chemical footprints of cellular regulatory processes in …
The progress of multi-omics technologies: determining function in lactic acid bacteria using a systems level approach
ST O'Donnell, RP Ross, C Stanton - Frontiers in microbiology, 2020 - frontiersin.org
Lactic Acid Bacteria (LAB) have long been recognized as having a significant impact
ranging from commercial to health domains. A vast amount of research has been carried out …
ranging from commercial to health domains. A vast amount of research has been carried out …
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
Y Zhou, B Zhou, L Pache, M Chang… - Nature …, 2019 - nature.com
A critical component in the interpretation of systems-level studies is the inference of enriched
biological pathways and protein complexes contained within OMICs datasets. Successful …
biological pathways and protein complexes contained within OMICs datasets. Successful …
WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit
Functional enrichment analysis has played a key role in the biological interpretation of high-
throughput omics data. As a long-standing and widely used web application for functional …
throughput omics data. As a long-standing and widely used web application for functional …
g: Profiler—a web server for functional interpretation of gene lists (2016 update)
Functional enrichment analysis is a key step in interpreting gene lists discovered in diverse
high-throughput experiments. g: Profiler studies flat and ranked gene lists and finds …
high-throughput experiments. g: Profiler studies flat and ranked gene lists and finds …
Patient-derived organoids and orthotopic xenografts of primary and recurrent gliomas represent relevant patient avatars for precision oncology
Patient-based cancer models are essential tools for studying tumor biology and for the
assessment of drug responses in a translational context. We report the establishment a large …
assessment of drug responses in a translational context. We report the establishment a large …
Strong phenotypic plasticity limits potential for evolutionary responses to climate change
V Oostra, M Saastamoinen, BJ Zwaan… - Nature …, 2018 - nature.com
Phenotypic plasticity, the expression of multiple phenotypes from one genome, is a
widespread adaptation to short-term environmental fluctuations, but whether it facilitates …
widespread adaptation to short-term environmental fluctuations, but whether it facilitates …
The innate immune sensor Toll-like receptor 2 controls the senescence-associated secretory phenotype
P Hari, FR Millar, N Tarrats, J Birch, A Quintanilla… - Science …, 2019 - science.org
Cellular senescence is a stress response program characterized by a robust cell cycle arrest
and the induction of a proinflammatory senescence-associated secretory phenotype (SASP) …
and the induction of a proinflammatory senescence-associated secretory phenotype (SASP) …
eVITTA: a web-based visualization and inference toolbox for transcriptome analysis
Transcriptome profiling is essential for gene regulation studies in development and disease.
Current web-based tools enable functional characterization of transcriptome data, but most …
Current web-based tools enable functional characterization of transcriptome data, but most …
Phantasus, a web application for visual and interactive gene expression analysis
M Kleverov, D Zenkova, V Kamenev, M Sablina… - Elife, 2024 - elifesciences.org
Transcriptomic profiling became a standard approach to quantify a cell state, which led to
the accumulation of huge amount of public gene expression datasets. However, both reuse …
the accumulation of huge amount of public gene expression datasets. However, both reuse …