Metabolomics 20 years on: what have we learned and what hurdles remain?

S Alseekh, AR Fernie - The Plant Journal, 2018 - Wiley Online Library
The term metabolome was coined in 1998, by analogy to genome, transcriptome and
proteome. The first research papers using the terms metabolomics, metabonomics …

Acyltransferases in plants: a good time to be BAHD

JC D'Auria - Current opinion in plant biology, 2006 - Elsevier
Acylation is a common and biochemically significant modification of plant secondary
metabolites. Plant BAHD acyltransferases constitute a large family of acyl CoA-utilizing …

A global coexpression network approach for connecting genes to specialized metabolic pathways in plants

JH Wisecaver, AT Borowsky, V Tzin, G Jander… - The Plant …, 2017 - academic.oup.com
Plants produce diverse specialized metabolites (SMs), but the genes responsible for their
production and regulation remain largely unknown, hindering efforts to tap plant …

The model organism as a system: integrating'omics' data sets

AR Joyce, BØ Palsson - Nature reviews Molecular cell biology, 2006 - nature.com
Various technologies can be used to produce genome-scale, or'omics', data sets that
provide systems-level measurements for virtually all types of cellular components in a model …

Genome‐wide analysis of phenylpropanoid defence pathways

MA Naoumkina, Q Zhao… - Molecular plant …, 2010 - Wiley Online Library
Phenylpropanoids can function as preformed and inducible antimicrobial compounds, as
well as signal molecules, in plant–microbe interactions. Since we last reviewed the field 8 …

Combined Analysis of the Fruit Metabolome and Transcriptome Reveals Candidate Genes Involved in Flavonoid Biosynthesis in Actinidia arguta

Y Li, J Fang, X Qi, M Lin, Y Zhong, L Sun… - International journal of …, 2018 - mdpi.com
To assess the interrelation between the change of metabolites and the change of fruit color,
we performed a combined metabolome and transcriptome analysis of the flesh in two …

Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold‐regulated gene expression with modifications in …

F Kaplan, J Kopka, DY Sung, W Zhao, M Popp… - The Plant …, 2007 - Wiley Online Library
Exposure of Arabidopsis to low temperatures results in cold acclimation where freezing
tolerance is enhanced. To achieve a wider view of the role of transcriptome to biochemical …

[图书][B] Natural products from plants

LJ Cseke, A Kirakosyan, PB Kaufman, S Warber… - 2016 - api.taylorfrancis.com
2008 NOMINEE The Council on Botanical and Horticultural Libraries Annual Award for a
Significant Work in Botanical or Horticultural Literature From medicinal, industrial, and …

Plant metabolomics: from holistic hope, to hype, to hot topic

RD Hall - New phytologist, 2006 - Wiley Online Library
In a short time, plant metabolomics has gone from being just an ambitious concept to being
a rapidly growing, valuable technology applied in the stride to gain a more global picture of …

Harnessing plant trichome biochemistry for the production of useful compounds

AL Schilmiller, RL Last, E Pichersky - The Plant Journal, 2008 - Wiley Online Library
Plant trichomes come in a variety of shapes, sizes and cellular composition. Some types,
commonly called glandular trichomes, produce large amounts of specialized (secondary) …