Coupling functions: universal insights into dynamical interaction mechanisms

T Stankovski, T Pereira, PVE McClintock… - Reviews of Modern …, 2017 - APS
The dynamical systems found in nature are rarely isolated. Instead they interact and
influence each other. The coupling functions that connect them contain detailed information …

Metabolic oscillations and glycolytic phenotypes of cancer cells

T Amemiya, K Shibata, T Yamaguchi - International Journal of Molecular …, 2023 - mdpi.com
Cancer cells show several metabolic phenotypes depending on the cancer types and the
microenvironments in tumor tissues. The glycolytic phenotype is one of the hallmarks of …

Biological oscillators in nanonetworks—Opportunities and challenges

E Shitiri, AV Vasilakos, HS Cho - Sensors, 2018 - mdpi.com
One of the major issues in molecular communication-based nanonetworks is the provision
and maintenance of a common time knowledge. To stay true to the definition of molecular …

Oscillatory signatures underlie growth regimes in Arabidopsis pollen tubes: computational methods to estimate tip location, periodicity, and synchronization in growing …

DSC Damineli, MT Portes… - Journal of experimental …, 2017 - academic.oup.com
Oscillations in pollen tubes have been reported for many cellular processes, including
growth, extracellular ion fluxes, and cytosolic ion concentrations. However, there is a …

Oscillations and dynamic symbiosis in cellular metabolism in cancer

T Amemiya, T Yamaguchi - Frontiers in Oncology, 2022 - frontiersin.org
The grade of malignancy differs among cancer cell types, yet it remains the burden of
genetic studies to understand the reasons behind this observation. Metabolic studies of …

Modeling cell energy metabolism as weighted networks of non-autonomous oscillators

J Rowland Adams, A Stefanovska - Frontiers in Physiology, 2021 - frontiersin.org
Networks of oscillating processes are a common occurrence in living systems. This is as true
as anywhere in the energy metabolism of individual cells. Exchanges of molecules and …

Stabilization of dynamics of oscillatory systems by nonautonomous perturbation

M Lucas, J Newman, A Stefanovska - Physical Review E, 2018 - APS
Synchronization and stability under periodic oscillatory driving are well understood, but little
is known about the effects of aperiodic driving, despite its abundance in nature. Here, we …

Nonautonomous driving induces stability in network of identical oscillators

M Lucas, D Fanelli, A Stefanovska - Physical Review E, 2019 - APS
Nonautonomous driving of an oscillator has been shown to enlarge the Arnold tongue in
parameter space, but little is known about the analogous effect for a network of oscillators …

Cross-talk between energy metabolism and epigenetics during temperature stress response in C2C12 myoblasts

B Sajjanar, P Siengdee, N Trakooljul, X Liu… - International Journal …, 2019 - Taylor & Francis
Objective: Environmental stress induces disturbances in cell energy metabolism and may
cause epigenetic modifications. This study aimed to understand the possible impact of …

Extracellular ionic fluxes suggest the basis for cellular life at the 1/f ridge of extended criticality

M Pietruszka, M Olszewska - European Biophysics Journal, 2020 - Springer
The criticality hypothesis states that a system may be poised in a critical state at the
boundary between different types of dynamics. Previous studies have suggested that …