Genome-wide association studies in maize: praise and stargaze

Y Xiao, H Liu, L Wu, M Warburton, J Yan - Molecular plant, 2017 - cell.com
Genome-wide association study (GWAS) has become a widely accepted strategy for
decoding genotype-phenotype associations in many species thanks to advances in next …

Technological advances in maize breeding: past, present and future

C Andorf, WD Beavis, M Hufford, S Smith… - Theoretical and applied …, 2019 - Springer
Maize has for many decades been both one of the most important crops worldwide and one
of the primary genetic model organisms. More recently, maize breeding has been impacted …

De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes

MB Hufford, AS Seetharam, MR Woodhouse… - Science, 2021 - science.org
We report de novo genome assemblies, transcriptomes, annotations, and methylomes for
the 26 inbreds that serve as the founders for the maize nested association mapping …

Genome sequencing reveals evidence of adaptive variation in the genus Zea

L Chen, J Luo, M Jin, N Yang, X Liu, Y Peng, W Li… - Nature Genetics, 2022 - nature.com
Maize is a globally valuable commodity and one of the most extensively studied genetic
model organisms. However, we know surprisingly little about the extent and potential utility …

Reconstructing the maize leaf regulatory network using ChIP-seq data of 104 transcription factors

X Tu, MK Mejía-Guerra, JA Valdes Franco… - Nature …, 2020 - nature.com
The transcription regulatory network inside a eukaryotic cell is defined by the combinatorial
actions of transcription factors (TFs). However, TF binding studies in plants are too few in …

ZmCCT9 enhances maize adaptation to higher latitudes

C Huang, H Sun, D Xu, Q Chen… - Proceedings of the …, 2018 - National Acad Sciences
From its tropical origin in southwestern Mexico, maize spread over a wide latitudinal cline in
the Americas. This feat defies the rule that crops are inhibited from spreading easily across …

Factors affecting the accuracy of genomic selection for agricultural economic traits in maize, cattle, and pig populations

H Zhang, L Yin, M Wang, X Yuan, X Liu - Frontiers in genetics, 2019 - frontiersin.org
Genomic Selection (GS) has been proved to be a powerful tool for estimating genetic values
in plant and livestock breeding. Newly developed sequencing technologies have …

The evening complex promotes maize flowering and adaptation to temperate regions

Y Zhao, B Zhao, Y Xie, H Jia, Y Li, M Xu, G Wu… - The Plant …, 2023 - academic.oup.com
Maize (Zea mays) originated in southern Mexico and has spread over a wide latitudinal
range. Maize expansion from tropical to temperate regions has necessitated a reduction of …

Applications of genotyping-by-sequencing (GBS) in maize genetics and breeding

N Wang, Y Yuan, H Wang, D Yu, Y Liu, A Zhang… - Scientific reports, 2020 - nature.com
Abstract Genotyping-by-Sequencing (GBS) is a low-cost, high-throughput genotyping
method that relies on restriction enzymes to reduce genome complexity. GBS is being widely …

Metabolic GWAS‐based dissection of genetic bases underlying the diversity of plant metabolism

C Fang, J Luo - The Plant Journal, 2019 - Wiley Online Library
Plants have served as sources providing humans with metabolites for food and nutrition,
biomaterials for living, and treatment for pain and disease. Plants produce a huge array of …