Animal functional magnetic resonance imaging: trends and path toward standardization
Animal whole-brain functional magnetic resonance imaging (fMRI) provides a non-invasive
window into brain activity. A collection of associated methods aims to replicate observations …
window into brain activity. A collection of associated methods aims to replicate observations …
DPABI: data processing & analysis for (resting-state) brain imaging
Brain imaging efforts are being increasingly devoted to decode the functioning of the human
brain. Among neuroimaging techniques, resting-state fMRI (R-fMRI) is currently expanding …
brain. Among neuroimaging techniques, resting-state fMRI (R-fMRI) is currently expanding …
Considerations for resting state functional MRI and functional connectivity studies in rodents
Resting state functional MRI (rs-fMRI) and functional connectivity mapping have become
widely used tools in the human neuroimaging community and their use is rapidly spreading …
widely used tools in the human neuroimaging community and their use is rapidly spreading …
[HTML][HTML] Waxholm Space atlas of the Sprague Dawley rat brain
Three-dimensional digital brain atlases represent an important new generation of
neuroinformatics tools for understanding complex brain anatomy, assigning location to …
neuroinformatics tools for understanding complex brain anatomy, assigning location to …
High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice
Detailed anatomical atlases can provide considerable interpretive power in studies of both
human and rodent neuroanatomy. Here we describe a three-dimensional atlas of the mouse …
human and rodent neuroanatomy. Here we describe a three-dimensional atlas of the mouse …
Uncovering hidden brain state dynamics that regulate performance and decision-making during cognition
Human cognition is influenced not only by external task demands but also latent mental
processes and brain states that change over time. Here, we use novel Bayesian switching …
processes and brain states that change over time. Here, we use novel Bayesian switching …
Waxholm space: an image-based reference for coordinating mouse brain research
GA Johnson, A Badea, J Brandenburg, G Cofer… - Neuroimage, 2010 - Elsevier
We describe an atlas of the C57BL/6 mouse brain based on MRI and conventional Nissl
histology. Magnetic resonance microscopy was performed on a total of 14 specimens that …
histology. Magnetic resonance microscopy was performed on a total of 14 specimens that …
An in vivo MRI Template Set for Morphometry, Tissue Segmentation, and fMRI Localization in Rats
PA Valdés-Hernández, A Sumiyoshi… - Frontiers in …, 2011 - frontiersin.org
Over the last decade, several papers have focused on the construction of highly detailed
mouse high field magnetic resonance image (MRI) templates via non-linear registration to …
mouse high field magnetic resonance image (MRI) templates via non-linear registration to …
[HTML][HTML] The SIGMA rat brain templates and atlases for multimodal MRI data analysis and visualization
Preclinical imaging studies offer a unique access to the rat brain, allowing investigations that
go beyond what is possible in human studies. Unfortunately, these techniques still suffer …
go beyond what is possible in human studies. Unfortunately, these techniques still suffer …
[HTML][HTML] Prodromal neuroinflammatory, cholinergic and metabolite dysfunction detected by PET and MRS in the TgF344-AD transgenic rat model of AD: a collaborative …
AM Chaney, FR Lopez-Picon, S Serrière, R Wang… - Theranostics, 2021 - ncbi.nlm.nih.gov
Mouse models of Alzheimer's disease (AD) are valuable but do not fully recapitulate human
AD pathology, such as spontaneous Tau fibril accumulation and neuronal loss …
AD pathology, such as spontaneous Tau fibril accumulation and neuronal loss …