Array-based high-throughput DNA markers for crop improvement

PK Gupta, S Rustgi, RR Mir - Heredity, 2008 - nature.com
The last two decades have witnessed a remarkable activity in the development and use of
molecular markers both in animal and plant systems. This activity started with low …

Eucalyptus applied genomics: from gene sequences to breeding tools

D Grattapaglia, M Kirst - New phytologist, 2008 - Wiley Online Library
Eucalyptus is the most widely planted hardwood crop in the tropical and subtropical world
because of its superior growth, broad adaptability and multipurpose wood properties …

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

International Wheat Genome Sequencing Consortium … - Science, 2014 - science.org
An ordered draft sequence of the 17-gigabase hexaploid bread wheat (Triticum aestivum)
genome has been produced by sequencing isolated chromosome arms. We have annotated …

A high‐density, SNP‐based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding

M Maccaferri, A Ricci, S Salvi, SG Milner… - Plant biotechnology …, 2015 - Wiley Online Library
Consensus linkage maps are important tools in crop genomics. We have assembled a high‐
density tetraploid wheat consensus map by integrating 13 data sets from independent …

Development and implementation of high-throughput SNP genotyping in barley

TJ Close, PR Bhat, S Lonardi, Y Wu, N Rostoks… - BMC genomics, 2009 - Springer
Background High density genetic maps of plants have, nearly without exception, made use
of marker datasets containing missing or questionable genotype calls derived from a variety …

Genome-wide association studies for agronomical traits in a world wide spring barley collection

RK Pasam, R Sharma, M Malosetti, FA van Eeuwijk… - BMC plant biology, 2012 - Springer
Background Genome-wide association studies (GWAS) based on linkage disequilibrium
(LD) provide a promising tool for the detection and fine mapping of quantitative trait loci …

Development of a large SNP genotyping array and generation of high-density genetic maps in tomato

SC Sim, G Durstewitz, J Plieske, R Wieseke… - PloS one, 2012 - journals.plos.org
The concurrent development of high-throughput genotyping platforms and next generation
sequencing (NGS) has increased the number and density of genetic markers, the efficiency …

Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: a barley case study

S Zhong, JCM Dekkers, RL Fernando, JL Jannink - Genetics, 2009 - academic.oup.com
We compared the accuracies of four genomic-selection prediction methods as affected by
marker density, level of linkage disequilibrium (LD), quantitative trait locus (QTL) number …

Tibet is one of the centers of domestication of cultivated barley

F Dai, E Nevo, D Wu, J Comadran… - Proceedings of the …, 2012 - National Acad Sciences
The Near East Fertile Crescent is well recognized as a primary center of barley origin,
diversity, and domestication. A large number of wild barleys have been collected from the …

Genome-wide association mapping: a case study in bread wheat (Triticum aestivum L.)

K Neumann, B Kobiljski, S Denčić, RK Varshney… - Molecular …, 2011 - Springer
Association-based trait mapping is an innovative methodology based on linkage
disequilibrium. Studies in plants, especially in cereals, are rare. A genome-wide association …