[HTML][HTML] Microbiome multi-omics network analysis: statistical considerations, limitations, and opportunities

D Jiang, CR Armour, C Hu, M Mei, C Tian… - Frontiers in …, 2019 - frontiersin.org
The advent of large-scale microbiome studies affords newfound analytical opportunities to
understand how these communities of microbes operate and relate to their environment …

[HTML][HTML] Integration of metabolomic and other omics data in population-based study designs: an epidemiological perspective

SH Chu, M Huang, RS Kelly, E Benedetti, JK Siddiqui… - Metabolites, 2019 - mdpi.com
It is not controversial that study design considerations and challenges must be addressed
when investigating the linkage between single omic measurements and human phenotypes …

A joint graphical model for inferring gene networks across multiple subpopulations and data types

XF Zhang, L Ou-Yang, T Yan, XT Hu… - IEEE transactions on …, 2019 - ieeexplore.ieee.org
Reconstructing gene networks from gene expression data is a long-standing challenge. In
most applications, the observations can be divided into several distinct but related …

An analytical study of COVID-19 dataset using graph-based clustering algorithms

M Das, PJA Alphonse, K Selvakumar - Smart Intelligent Computing and …, 2022 - Springer
Abstract COrona VIrus Disease abbreviated as COVID-19 is a novel virus which is initially
identified in Wuhan of China in December of 2019, and now, this deadly disease has spread …

Markov clustering algorithms and their application in analysis of PPI network of malaria genes

M Das, PJA Alphonse… - 2021 11th IEEE …, 2021 - ieeexplore.ieee.org
An empirical study on three graph-based clustering algorithms has been presented here.
We have discussed those three clustering algorithms and made an analysis. The algorithms …

[图书][B] Kernel regression utilizing external information as constraints

CS Dai - 2023 - search.proquest.com
Researchers now integrate multiple datasets from various sources to better understand
scientific studies. Advanced technology allows for well-designed primary studies with …

[PDF][PDF] Iterative integrated imputation for missing data and pathway models with applications to breast cancer subtypes

H Linder, Y Zhang - Communications for Statistical Applications …, 2019 - koreascience.kr
Tumor development is driven by complex combinations of biological elements. Recent
advances suggest that molecularly distinct subtypes of breast cancers may respond …

An Analytical Study of Covid-19 Dataset using Graph-Based Clustering Algorithms

M Das, PJA Alphonse - arXiv preprint arXiv:2308.04697, 2023 - arxiv.org
Corona VIrus Disease abbreviated as COVID-19 is a novel virus which is initially identified
in Wuhan of China in December of 2019 and now this deadly disease has spread all over …

Adaptive noisy data augmentation for regularized construction of undirected graphical models

Y Li, F Liu, X Liu - 2021 IEEE 8th International Conference on …, 2021 - ieeexplore.ieee.org
We develop the AdaPtive Noise Augmentation (PANDA) technique to regularize the
estimation of undirected graphical models. PANDA iteratively optimizes the objective …

A GMM approach in coupling internal data and external summary information with heterogeneous data populations

J Shao, J Wang, L Wang - Science China Mathematics, 2024 - Springer
Because of advances in data collection and storage, statistical analysis in modern scientific
research and practice now has opportunities to utilize external information such as summary …