Detection of SARS-CoV-2 variants mu, beta, gamma, lambda, delta, alpha, and omicron in wastewater settled solids using mutation-specific assays is associated with …
M Wolfe, B Hughes, D Duong… - Applied and …, 2022 - Am Soc Microbiol
Changes in the circulation of SARS-CoV-2 variants of concern (VOCs) may require changes
in the public health response to the COVID-19 pandemic, as they have the potential to …
in the public health response to the COVID-19 pandemic, as they have the potential to …
A rapid, high-throughput, and sensitive PEG-precipitation method for SARS-CoV-2 wastewater surveillance
The effective application of wastewater surveillance is dependent on testing capacity and
sensitivity to obtain high spatial resolution testing results for a timely targeted public health …
sensitivity to obtain high spatial resolution testing results for a timely targeted public health …
A snapshot of the global drinking water virome: Diversity and metabolic potential vary with residual disinfectant use
Viruses are important drivers of microbial community ecology and evolution, influencing
microbial mortality, metabolism, and horizontal gene transfer. However, the effects of viruses …
microbial mortality, metabolism, and horizontal gene transfer. However, the effects of viruses …
[HTML][HTML] Optimization and evaluation of viral metagenomic amplification and sequencing procedures toward a genome-level resolution of the human fecal DNA virome
Introduction Viruses in the human gut have been linked to health and disease. Deciphering
the gut virome is dependent on metagenomic sequencing of the virus-like particles (VLPs) …
the gut virome is dependent on metagenomic sequencing of the virus-like particles (VLPs) …
Surface microlayer-mediated virome dissemination in the Central Arctic
Background Aquatic viruses act as key players in shaping microbial communities. In polar
environments, they face significant challenges such as limited host availability and harsh …
environments, they face significant challenges such as limited host availability and harsh …
Chloride enhances DNA reactivity with chlorine under conditions relevant to water treatment
A Szczuka, J Horton, KJ Evans, VT DiPietri… - Environmental …, 2022 - ACS Publications
Free available chlorine (FAC) is widely used to inactivate viruses by oxidizing viral
components, including genomes. It is commonly assumed that hypochlorous acid (HOCl) is …
components, including genomes. It is commonly assumed that hypochlorous acid (HOCl) is …
Ecogenomics and cultivation reveal distinctive viral-bacterial communities in the surface microlayer of a Baltic Sea slick
Visible surface films, termed slicks, can extensively cover freshwater and marine
ecosystems, with coastal regions being particularly susceptible to their presence. The sea …
ecosystems, with coastal regions being particularly susceptible to their presence. The sea …
[HTML][HTML] Evaluation of a virus concentration method based on ultrafiltration and wet foam elution for studying viruses from large-volume water samples
E Forés, M Rusiñol, M Itarte, S Martínez-Puchol… - Science of the Total …, 2022 - Elsevier
Assessing the presence of viruses in large-volume samples involves cumbersome methods
that require specialized training and laboratory equipment. In this study, a large volume …
that require specialized training and laboratory equipment. In this study, a large volume …
Large-scale single-virus genomics uncovers hidden diversity of river water viruses and diversified gene profiles
Y Nishikawa, R Wagatsuma, Y Tsukada… - The ISME …, 2024 - academic.oup.com
Environmental viruses (primarily bacteriophages) are widely recognized as playing an
important role in ecosystem homeostasis through the infection of host cells. However, the …
important role in ecosystem homeostasis through the infection of host cells. However, the …
SARS-CoV-2 variants detection strategies in wastewater samples collected in the Bangkok Metropolitan region
R Tangwangvivat, S Wacharapluesadee… - Viruses, 2023 - mdpi.com
Wastewater surveillance is considered a promising approach for COVID-19 surveillance in
communities. In this study, we collected wastewater samples between November 2020 and …
communities. In this study, we collected wastewater samples between November 2020 and …