Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols

J Zimmermann, R Jahn, B Gemeinholzer - Organisms Diversity & Evolution, 2011 - Springer
Diatoms are present in all types of water bodies and their species diversity is influenced
greatly by environmental conditions. This means that diatom occurrence and abundances …

Soil organic carbon stabilization mechanisms in a subtropical mangrove and salt marsh ecosystems

H Sun, J Jiang, L Cui, W Feng, Y Wang… - Science of The Total …, 2019 - Elsevier
Mangrove and salt marsh ecosystems are one of the most productive ecosystems in
terrestrial ecosystems, playing an important role in global carbon (C) cycling. The anaerobic …

Microbiology and geochemistry of great boiling and mud hot springs in the United States Great Basin

KC Costa, JB Navarro, EL Shock, CL Zhang, D Soukup… - Extremophiles, 2009 - Springer
A coordinated study of water chemistry, sediment mineralogy, and sediment microbial
community was conducted on four> 73° C springs in the northwestern Great Basin. Despite …

Trace metal pollution risk assessment in urban mangrove patches: Potential linkage with the spectral characteristics of chromophoric dissolved organic matter

H Hong, S Wu, Q Wang, L Qian, H Lu, J Liu, HJ Lin… - Environmental …, 2021 - Elsevier
Mangroves are inter-tidal ecosystems with important global ecological roles. Today,
mangroves around the world are at risk of fragmentation, especially in areas with rapid …

Arcobacter in Lake Erie beach waters: an emerging gastrointestinal pathogen linked with human-associated fecal contamination

C Lee, S Agidi, JW Marion, J Lee - Applied and Environmental …, 2012 - Am Soc Microbiol
The genus Arcobacter has been associated with human illness and fecal contamination by
humans and animals. To better characterize the health risk posed by this emerging …

Coastal bacterioplankton community dynamics in response to a natural disturbance

SK Yeo, MJ Huggett, A Eiler, MS Rappé - PLoS One, 2013 - journals.plos.org
In order to characterize how disturbances to microbial communities are propagated over
temporal and spatial scales in aquatic environments, the dynamics of bacterial assemblages …

Unraveling the environmental and anthropogenic drivers of bacterial community changes in the Estuary of Bilbao and its tributaries

M Aguirre, D Abad, A Albaina, L Cralle… - PloS one, 2017 - journals.plos.org
In this study, 16S rRNA gene sequencing was used to characterize the changes in
taxonomic composition and environmental factors significantly influencing bacterial …

Melting glacier impacts community structure of B acteria, A rchaea and F ungi in a C hilean P atagonia fjord

MH Gutiérrez, PE Galand, C Moffat… - Environmental …, 2015 - Wiley Online Library
J orge M ontt glacier, located in the P atagonian I ce F ields, has undergone an
unprecedented retreat during the past century. To study the impact of the meltwater …

Bacterial communities reflect the spatial variation in pollutant levels in Brazilian mangrove sediment

R Peixoto, GM Chaer, FL Carmo, FV Araújo… - Antonie Van …, 2011 - Springer
The majority of oil from oceanic oil spills converges on coastal ecosystems such as
mangrove forests. A major challenge to mangrove bioremediation is defining the mangrove's …

Biogeography and phylogeny of the NOR5/OM60 clade of Gammaproteobacteria

S Yan, BM Fuchs, S Lenk, J Harder, J Wulf… - Systematic and Applied …, 2009 - Elsevier
The phylogeny, abundance, and biogeography of the NOR5/OM60 clade was investigated.
This clade includes “Congregibacter litoralis” strain KT71, the first cultured representative of …