African genetic diversity: implications for human demographic history, modern human origins, and complex disease mapping

MC Campbell, SA Tishkoff - Annu. Rev. Genomics Hum. Genet., 2008 - annualreviews.org
Comparative studies of ethnically diverse human populations, particularly in Africa, are
important for reconstructing human evolutionary history and for understanding the genetic …

Traversing the conceptual divide between biological and statistical epistasis: systems biology and a more modern synthesis

JH Moore, SM Williams - Bioessays, 2005 - Wiley Online Library
Epistasis plays an important role in the genetic architecture of common human diseases and
can be viewed from two perspectives, biological and statistical, each derived from and …

A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility

JH Moore, JC Gilbert, CT Tsai, FT Chiang… - Journal of theoretical …, 2006 - Elsevier
Detecting, characterizing, and interpreting gene–gene interactions or epistasis in studies of
human disease susceptibility is both a mathematical and a computational challenge. To …

Bayesian inference of epistatic interactions in case-control studies

Y Zhang, JS Liu - Nature genetics, 2007 - nature.com
Epistatic interactions among multiple genetic variants in the human genome may be
important in determining individual susceptibility to common diseases. Although some …

Bioinformatics challenges for personalized medicine

GH Fernald, E Capriotti, R Daneshjou… - …, 2011 - academic.oup.com
Motivation: Widespread availability of low-cost, full genome sequencing will introduce new
challenges for bioinformatics. Results: This review outlines recent developments in …

A balanced accuracy function for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction

DR Velez, BC White, AA Motsinger… - … Official Publication of …, 2007 - Wiley Online Library
Multifactor dimensionality reduction (MDR) was developed as a method for detecting
statistical patterns of epistasis. The overall goal of MDR is to change the representation …

A random forest approach to the detection of epistatic interactions in case-control studies

R Jiang, W Tang, X Wu, W Fu - BMC bioinformatics, 2009 - Springer
Background The key roles of epistatic interactions between multiple genetic variants in the
pathogenesis of complex diseases notwithstanding, the detection of such interactions …

The evolving impact of g protein-coupled receptor kinases in cardiac health and disease

PY Sato, JK Chuprun, M Schwartz… - Physiological …, 2015 - journals.physiology.org
G protein-coupled receptors (GPCRs) are important regulators of various cellular functions
via activation of intracellular signaling events. Active GPCR signaling is shut down by GPCR …

Machine learning for detecting gene-gene interactions: a review

BA McKinney, DM Reif, MD Ritchie, JH Moore - Applied bioinformatics, 2006 - Springer
Complex interactions among genes and environmental factors are known to play a role in
common human disease aetiology. There is a growing body of evidence to suggest that …

Computational analysis of gene-gene interactions using multifactor dimensionality reduction

JH Moore - Expert review of molecular diagnostics, 2004 - Taylor & Francis
Understanding the relationship between DNA sequence variations and biologic traits is
expected to improve the diagnosis, prevention and treatment of common human diseases …