The hidden half: ecology and evolution of cryptobenthic fishes on coral reefs

SJ Brandl, CHR Goatley, DR Bellwood… - Biological …, 2018 - Wiley Online Library
Teleost fishes are the most diverse group of vertebrates on Earth. On tropical coral reefs,
their species richness exceeds 6000 species; one tenth of total vertebrate biodiversity. A …

DNA barcoding to fishes: current status and future directions

M Bhattacharya, AR Sharma, BC Patra… - … DNA Part A, 2016 - Taylor & Francis
DNA barcoding appears to be a promising approach for taxonomic identification,
characterization, and discovery of newer species, facilitating biodiversity studies. It helps …

On the inappropriate use of Kimura‐2‐parameter (K2P) divergences in the DNA‐barcoding literature

A Srivathsan, R Meier - Cladistics, 2012 - Wiley Online Library
Here we present evidence, based on 10 datasets comprising 5283 sequences for 200
genera, that the use of the Kimura‐2‐parameter (K2P) model in DNA‐barcoding studies is …

Monitoring an alien invasion: DNA barcoding and the identification of lionfish and their prey on coral reefs of the Mexican Caribbean

M Valdez-Moreno, C Quintal-Lizama… - PloS one, 2012 - journals.plos.org
Background In the Mexican Caribbean, the exotic lionfish Pterois volitans has become a
species of great concern because of their predatory habits and rapid expansion onto the …

Defining and dividing the greater Caribbean: insights from the biogeography of shorefishes

DR Robertson, KL Cramer - PLoS One, 2014 - journals.plos.org
The Greater Caribbean biogeographic region is the high-diversity heart of the Tropical West
Atlantic, one of four global centers of tropical marine biodiversity. The traditional view of the …

[HTML][HTML] GenSeq: an updated nomenclature and ranking for genetic sequences from type and non-type sources

P Chakrabarty, M Warren, LM Page, CC Baldwin - ZooKeys, 2013 - ncbi.nlm.nih.gov
An improved and expanded nomenclature for genetic sequences is introduced that
corresponds with a ranking of the reliability of the taxonomic identification of the source …

Longer is not always better: Optimizing barcode length for large-scale species discovery and identification

D Yeo, A Srivathsan, R Meier - Systematic Biology, 2020 - academic.oup.com
New techniques for the species-level sorting of millions of specimens are needed in order to
accelerate species discovery, determine how many species live on earth, and develop …

Using DNA barcoding to assess Caribbean reef fish biodiversity: expanding taxonomic and geographic coverage

LA Weigt, CC Baldwin, A Driskell, DG Smith, A Ormos… - PloS one, 2012 - journals.plos.org
This paper represents a DNA barcode data release for 3,400 specimens representing 521
species of fishes from 6 areas across the Caribbean and western central Atlantic regions …

The critical role of natural history museums in advancing eDNA for biodiversity studies: a case study with Amazonian fishes

CD de Santana, LR Parenti, CB Dillman… - Scientific Reports, 2021 - nature.com
Ichthyological surveys have traditionally been conducted using whole-specimen, capture-
based sampling with varied but conventional fishing gear. Recently, environmental DNA …

Using different methods to access the difficult task of delimiting species in a complex Neotropical hyperdiverse group

GJ Costa-Silva, MS Rodriguez, FF Roxo, F Foresti… - PLoS …, 2015 - journals.plos.org
The genus Rineloricaria is a Neotropical freshwater fish group with a long and problematic
taxonomic history, attributed to the large number of species and the pronounced similarity …