[HTML][HTML] Microbial interactions in theory and practice: when are measurements compatible with models?
Most predictive models of ecosystem dynamics are based on interactions between
organisms: their influence on each other's growth and death. We review here how …
organisms: their influence on each other's growth and death. We review here how …
Engineering Microbial Consortia as Living Materials: Advances and Prospectives
The field of Engineered Living Materials (ELMs) integrates engineered living organisms into
natural biomaterials to achieve diverse objectives. Multiorganism consortia, prevalent in …
natural biomaterials to achieve diverse objectives. Multiorganism consortia, prevalent in …
Metabolic picture of microbial interaction: chemical crosstalk during co-cultivation between three dominant genera of bacteria and fungi in medicinal plants …
MM Zohair, W Dongmei, K Shimizu - Metabolomics, 2024 - Springer
Introduction Microbial communities affect several aspects of the earth's ecosystem through
their metabolic interaction. The dynamics of this interaction emerge from complex multilevel …
their metabolic interaction. The dynamics of this interaction emerge from complex multilevel …
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities
N Giordano, M Gaudin, C Trottier, E Delage… - Nature …, 2024 - nature.com
Marine microorganisms form complex communities of interacting organisms that influence
central ecosystem functions in the ocean such as primary production and nutrient cycling …
central ecosystem functions in the ocean such as primary production and nutrient cycling …
Bridging systems biology and tissue engineering: Unleashing the full potential of complex 3D in vitro tissue models of disease
Rapid advances in tissue engineering have resulted in more complex and physiologically
relevant 3D in vitro tissue models with applications in fundamental biology and therapeutic …
relevant 3D in vitro tissue models with applications in fundamental biology and therapeutic …
[HTML][HTML] A Review on the Interaction of Acetic Acid Bacteria and Microbes in Food Fermentation: A Microbial Ecology Perspective
D Han, Y Yang, Z Guo, S Dai, M Jiang, Y Zhu, Y Wang… - Foods, 2024 - mdpi.com
In fermented foods, acetic acid bacteria (AAB), kinds of bacteria with a long history of
utilization, contribute to safety, nutritional, and sensory properties primarily through acetic …
utilization, contribute to safety, nutritional, and sensory properties primarily through acetic …
Culturing the unculturables: strategies, challenges, and opportunities for gut microbiome study
Metagenome sequencing techniques revolutionized the field of gut microbiome study.
However, it is equipped with experimental and computational biases, which affect the …
However, it is equipped with experimental and computational biases, which affect the …
Modeling Microbial Community Networks: Methods and Tools for Studying Microbial Interactions
Microbial interactions function as a fundamental unit in complex ecosystems. By
characterizing the type of interaction (positive, negative, neutral) occurring in these dynamic …
characterizing the type of interaction (positive, negative, neutral) occurring in these dynamic …
Searching for principles of microbial ecology across levels of biological organization
M Gralka - Integrative and Comparative Biology, 2023 - academic.oup.com
Microbial communities play pivotal roles in ecosystems across different scales, from global
elemental cycles to household food fermentations. These complex assemblies comprise …
elemental cycles to household food fermentations. These complex assemblies comprise …
[HTML][HTML] Guild and niche determination enable targeted alteration of the microbiome
Microbiome science has greatly contributed to our understanding of microbial life and its
essential roles for the environment and human health 1–5. However, the nature of microbial …
essential roles for the environment and human health 1–5. However, the nature of microbial …