phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things)

LJ Revell - PeerJ, 2024 - peerj.com
Phylogenetic comparative methods comprise the general endeavor of using an estimated
phylogenetic tree (or set of trees) to make secondary inferences: about trait evolution …

A phylogenetic and functional perspective on the origin and evolutionary shifts of growth ring anatomical markers in seed plants

MS Silva, LS Funch, LB da Silva… - Biological Reviews, 2021 - Wiley Online Library
We reconstruct the evolutionary changes in different anatomical markers in order to
understand the evolution and functional aspects of growth rings during the diversification of …

Biogeographic history of a large clade of ectomycorrhizal fungi, the Russulaceae, in the Neotropics and adjacent regions

J Hackel, TW Henkel, PA Moreau, E De Crop… - New …, 2022 - Wiley Online Library
The biogeography of neotropical fungi remains poorly understood. Here, we reconstruct the
origins and diversification of neotropical lineages in one of the largest clades of …

Nonsymbiotic legumes are more invasive, but only if polyploid

ZA Parshuram, TL Harrison, AK Simonsen… - New …, 2023 - Wiley Online Library
Both mutualism and polyploidy are thought to influence invasion success in plants, but few
studies have tested their joint effects. Mutualism can limit range expansion when plants …

Phylogenetic signal and rate of evolutionary change in language structures

N Hübler - Royal Society Open Science, 2022 - royalsocietypublishing.org
Within linguistics, there is an ongoing debate about whether some language structures
remain stable over time, which structures these are and whether they can be used to …

Long‐wavelength‐sensitive (lws) opsin gene expression, foraging and visual communication in coral reef fishes

SM Stieb, F Cortesi, L Jardim de Queiroz… - Molecular …, 2023 - Wiley Online Library
Coral reef fishes are diverse in ecology and behaviour and show remarkable colour
variability. Investigating the visual pigment gene (opsin) expression in these fishes makes it …

[HTML][HTML] Radiation of mushroom-forming fungi correlates with novel modes of protecting sexual fruiting bodies

T Varga, C Földi, V Bense, LG Nagy - Fungal Biology, 2022 - Elsevier
The protection of vulnerable developing structures evolved repeatedly in terrestrial
organisms and includes, among others, viviparity in animals and the seed in land plants. In …

Did early shifts to bird pollination impose constraints on Salvia flower evolution?

F Sazatornil, J Fornoni, I Fragoso-Martínez… - …, 2023 - academic.oup.com
A recent article by examines the relationship between floral shape evolution and pollination
shifts in Salvia, a plant genus almost worldwide distributed, but particularly diverse in the …

Anuran swingers: misdirected mating attempts occurred early during anuran diversification

F Brischoux, L Lorrain-Soligon - Biological Journal of the …, 2024 - academic.oup.com
Promiscuity, explosive breeding and male-biased operational sex-ratios can affect the
strength of male selectivity and may play major roles in the expression of misdirected …

Tempo and mode of winter diapause evolution in butterflies

S Halali, E Yapar, CW Wheat, N Wahlberg… - Evolution …, 2024 - academic.oup.com
Quantifying the tempo and mode via modern phylogenetic comparative methods can
provide key insights into how selection and constraints shape trait evolution on a …