Applications of single-cell RNA sequencing in drug discovery and development

B Van de Sande, JS Lee, E Mutasa-Gottgens… - Nature Reviews Drug …, 2023 - nature.com
Single-cell technologies, particularly single-cell RNA sequencing (scRNA-seq) methods,
together with associated computational tools and the growing availability of public data …

Predictive biomarkers of colon cancer immunotherapy: Present and future

W Hou, C Yi, H Zhu - Frontiers in immunology, 2022 - frontiersin.org
Immunotherapy has revolutionized colon cancer treatment. Immune checkpoint inhibitors
(ICIs) have shown clinical benefits for colon cancer patients, especially those with high …

DrugMAP: molecular atlas and pharma-information of all drugs

F Li, J Yin, M Lu, M Mou, Z Li, Z Zeng, Y Tan… - Nucleic acids …, 2023 - academic.oup.com
The efficacy and safety of drugs are widely known to be determined by their interactions with
multiple molecules of pharmacological importance, and it is therefore essential to …

Colorectal cancer organoid–stroma biobank allows subtype-specific assessment of individualized therapy responses

HF Farin, MH Mosa, B Ndreshkjana, BM Grebbin… - Cancer discovery, 2023 - AACR
In colorectal cancers, the tumor microenvironment plays a key role in prognosis and therapy
efficacy. Patient-derived tumor organoids (PDTO) show enormous potential for preclinical …

Single cell dynamics of tumor specificity vs bystander activity in CD8+ T cells define the diverse immune landscapes in colorectal cancer

DM Borràs, S Verbandt, M Ausserhofer, G Sturm, J Lim… - Cell Discovery, 2023 - nature.com
CD8+ T cell activation via immune checkpoint blockade (ICB) is successful in microsatellite
instable (MSI) colorectal cancer (CRC) patients. By comparison, the success of …

[HTML][HTML] Spatially resolved multi-omics single-cell analyses inform mechanisms of immune dysfunction in pancreatic cancer

S Yousuf, M Qiu, LV von Voithenberg, J Hulkkonen… - Gastroenterology, 2023 - Elsevier
Background & Aims As pancreatic ductal adenocarcinoma (PDAC) continues to be
recalcitrant to therapeutic interventions, including poor response to immunotherapy, albeit …

Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

A Sathe, K Mason, SM Grimes, Z Zhou, BT Lau… - Clinical Cancer …, 2023 - AACR
Purpose: The liver is the most frequent metastatic site for colorectal cancer. Its
microenvironment is modified to provide a niche that is conducive for colorectal cancer cell …

Role of electrochemical nanobiosensors in colorectal cancer precision medicine

AF Cruz-Pacheco, D Echeverri, J Orozco - TrAC Trends in Analytical …, 2023 - Elsevier
Precision medicine has been potentialized with cutting-edge analytical tools based on
electrochemical nanobiosensors as an emerging strategy to personalize diagnosing and …

Profiling the heterogeneity of colorectal cancer consensus molecular subtypes using spatial transcriptomics

A Valdeolivas, B Amberg, N Giroud… - NPJ precision …, 2024 - nature.com
The consensus molecular subtypes (CMS) of colorectal cancer (CRC) is the most widely-
used gene expression-based classification and has contributed to a better understanding of …

C1q and central nervous system disorders

W Zhang, Y Chen, H Pei - Frontiers in Immunology, 2023 - frontiersin.org
C1q is a crucial component of the complement system, which is activated through the
classical pathway to perform non-specific immune functions, serving as the first line of …