Autonomous metabolomics for rapid metabolite identification in global profiling
An autonomous metabolomic workflow combining mass spectrometry analysis with tandem
mass spectrometry data acquisition was designed to allow for simultaneous data processing …
mass spectrometry data acquisition was designed to allow for simultaneous data processing …
[HTML][HTML] Application of phenotypic microarrays to environmental microbiology
Environmental organisms are extremely diverse and only a small fraction has been
successfully cultured in the laboratory. Culture in micro wells provides a method for rapid …
successfully cultured in the laboratory. Culture in micro wells provides a method for rapid …
Global transcriptome response to ionic liquid by a tropical rain forest soil bacterium, Enterobacter lignolyticus
JI Khudyakov, P D'haeseleer… - Proceedings of the …, 2012 - National Acad Sciences
To process plant-based renewable biofuels, pretreatment of plant feedstock with ionic
liquids has significant advantages over current methods for deconstruction of lignocellulosic …
liquids has significant advantages over current methods for deconstruction of lignocellulosic …
The evolution of metabolic networks of E. coli
DJ Baumler, RG Peplinski, JL Reed, JD Glasner… - BMC systems …, 2011 - Springer
Background Despite the availability of numerous complete genome sequences from E. coli
strains, published genome-scale metabolic models exist only for two commensal E. coli …
strains, published genome-scale metabolic models exist only for two commensal E. coli …
Impact of elevated nitrate on sulfate-reducing bacteria: a comparative Study of Desulfovibrio vulgaris
Sulfate-reducing bacteria have been extensively studied for their potential in heavy-metal
bioremediation. However, the occurrence of elevated nitrate in contaminated environments …
bioremediation. However, the occurrence of elevated nitrate in contaminated environments …
Global insights into energetic and metabolic networks in Rhodobacter sphaeroides
Background Improving our understanding of processes at the core of cellular lifestyles can
be aided by combining information from genetic analyses, high-throughput experiments and …
be aided by combining information from genetic analyses, high-throughput experiments and …
Complete genome sequence of the lignin-degrading bacterium Klebsiella sp. strain BRL6-2
HL Woo, NR Ballor, TC Hazen, JL Fortney… - Standards in genomic …, 2014 - Springer
In an effort to discover anaerobic bacteria capable of lignin degradation, we isolated
Klebsiella sp. strain BRL6-2 on minimal media with alkali lignin as the sole carbon source …
Klebsiella sp. strain BRL6-2 on minimal media with alkali lignin as the sole carbon source …
Cr(VI) reduction and physiological toxicity are impacted by resource ratio in Desulfovibrio vulgaris
Desulfovibrio spp. are capable of heavy metal reduction and are well-studied systems for
understanding metal fate and transport in anaerobic environments. Desulfovibrio vulgaris …
understanding metal fate and transport in anaerobic environments. Desulfovibrio vulgaris …
Unintended Laboratory-Driven Evolution Reveals Genetic Requirements for Biofilm Formation by Desulfovibrio vulgaris Hildenborough
Biofilms of sulfate-reducing bacteria (SRB) are of particular interest as members of this
group are culprits in corrosion of industrial metal and concrete pipelines as well as being …
group are culprits in corrosion of industrial metal and concrete pipelines as well as being …
Development of multiwell-plate methods using pure cultures of methanogens to identify new inhibitors for suppressing ruminant methane emissions
MR Weimar, J Cheung, D Dey… - Applied and …, 2017 - Am Soc Microbiol
Hydrogenotrophic methanogens typically require strictly anaerobic culturing conditions in
glass tubes with overpressures of H2 and CO2 that are both time-consuming and costly. To …
glass tubes with overpressures of H2 and CO2 that are both time-consuming and costly. To …