[HTML][HTML] Recent advances in biosynthesis of bioactive compounds in traditional Chinese medicinal plants
L Yang, C Yang, C Li, Q Zhao, L Liu, X Fang, XY Chen - Science bulletin, 2016 - Elsevier
Plants synthesize and accumulate large amount of specialized (or secondary) metabolites
also known as natural products, which provide a rich source for modern pharmacy. In China …
also known as natural products, which provide a rich source for modern pharmacy. In China …
PLEK: a tool for predicting long non-coding RNAs and messenger RNAs based on an improved k-mer scheme
Background High-throughput transcriptome sequencing (RNA-seq) technology promises to
discover novel protein-coding and non-coding transcripts, particularly the identification of …
discover novel protein-coding and non-coding transcripts, particularly the identification of …
Bioinformatics opportunities for identification and study of medicinal plants
Plants have been used as a source of medicine since historic times and several
commercially important drugs are of plant-based origin. The traditional approach towards …
commercially important drugs are of plant-based origin. The traditional approach towards …
De Novo Assembly of Chickpea Transcriptome Using Short Reads for Gene Discovery and Marker Identification
Chickpea ranks third among the food legume crops production in the world. However, the
genomic resources available for chickpea are still very limited. In the present study, the …
genomic resources available for chickpea are still very limited. In the present study, the …
Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers
W Wei, X Qi, L Wang, Y Zhang, W Hua, D Li, H Lv… - BMC genomics, 2011 - Springer
Background Sesame is an important oil crop, but limited transcriptomic and genomic data
are currently available. This information is essential to clarify the fatty acid and lignan …
are currently available. This information is essential to clarify the fatty acid and lignan …
Molecular insights into the interaction of RONS and Thieno [3, 2-c] pyran analogs with SIRT6/COX-2: A molecular dynamics study
SIRT6 and COX-2 are oncogenes target that promote the expression of proinflammatory and
pro-survival proteins through a signaling pathway, which leads to increased survival and …
pro-survival proteins through a signaling pathway, which leads to increased survival and …
Transcriptome Sequencing and De Novo Analysis for Yesso Scallop (Patinopecten yessoensis) Using 454 GS FLX
Background Bivalves comprise 30,000 extant species, constituting the second largest group
of mollusks. However, limited genetic research has focused on this group of animals so far …
of mollusks. However, limited genetic research has focused on this group of animals so far …
Identification of SNP and SSR markers in eggplant using RAD tag sequencing
Abstract Background The eggplant (Solanum melongena L.) genome is relatively
unexplored, especially compared to those of the other major Solanaceae crops tomato and …
unexplored, especially compared to those of the other major Solanaceae crops tomato and …
Comparing de novo assemblers for 454 transcriptome data
S Kumar, ML Blaxter - BMC genomics, 2010 - Springer
Background Roche 454 pyrosequencing has become a method of choice for generating
transcriptome data from non-model organisms. Once the tens to hundreds of thousands of …
transcriptome data from non-model organisms. Once the tens to hundreds of thousands of …
De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity
Background Among next generation sequence technologies, platforms such as Illumina and
SOLiD produce short reads but with higher coverage and lower cost per sequenced …
SOLiD produce short reads but with higher coverage and lower cost per sequenced …