Winter limnology: how do hydrodynamics and biogeochemistry shape ecosystems under ice?

J Jansen, S MacIntyre, DC Barrett… - Journal of …, 2021 - Wiley Online Library
The ice‐cover period in lakes is increasingly recognized for its distinct combination of
physical and biological phenomena and ecological relevance. Knowledge gaps exist where …

A network approach to elucidate and prioritize microbial dark matter in microbial communities

T Zamkovaya, JS Foster, V de Crécy-Lagard… - The ISME …, 2021 - academic.oup.com
Microbes compose most of the biomass on the planet, yet the majority of taxa remain
uncharacterized. These unknown microbes, often referred to as “microbial dark matter,” …

Modular community structure suggests metabolic plasticity during the transition to polar night in ice-covered Antarctic lakes

TJ Vick-Majors, JC Priscu, LA Amaral-Zettler - The ISME journal, 2014 - academic.oup.com
High-latitude environments, such as the Antarctic McMurdo Dry Valley lakes, are subject to
seasonally segregated light–dark cycles, which have important consequences for microbial …

Grape pomace compost harbors organohalide-respiring Dehalogenimonas species with novel reductive dehalogenase genes

Y Yang, SA Higgins, J Yan, B Şimşir… - The ISME …, 2017 - academic.oup.com
Organohalide-respiring bacteria have key roles in the natural chlorine cycle; however, most
of the current knowledge is based on cultures from contaminated environments. We …

Oxygen depletion in Arctic lakes: circumpolar trends, biogeochemical processes, and implications of climate change

Y Klanten, RM Couture… - Global …, 2023 - Wiley Online Library
Polar amplification of climate change has the potential to cause large‐scale shifts in the
dissolved oxygen (DO) dynamics of Arctic lakes, with implications for fish survival …

Effects of water stratification and mixing on microbial community structure in a subtropical deep reservoir

Z Yu, J Yang, S Amalfitano, X Yu, L Liu - Scientific reports, 2014 - nature.com
Microorganisms play pivotal roles within aquatic ecosystems, affecting their structure,
functioning and services. However, little is known about the effects of water stratification and …

Influence of 16S rRNA variable region on perceived diversity of marine microbial communities of the Northern North Atlantic

C Willis, D Desai, J LaRoche - FEMS microbiology letters, 2019 - academic.oup.com
Marine microbes play essential roles in global energy and nutrient cycles. A primary method
of determining their diversity and distribution is through sequencing of 16S ribosomal RNA …

Bacterial community structure across environmental gradients in permafrost thaw ponds: methanotroph-rich ecosystems

S Crevecoeur, WF Vincent, J Comte… - Frontiers in …, 2015 - frontiersin.org
Permafrost thawing leads to the formation of thermokarst ponds that potentially emit CO2
and CH4 to the atmosphere. In the Nunavik subarctic region (northern Québec, Canada) …

Genomic evidence of functional diversity in DPANN archaea, from oxic species to anoxic vampiristic consortia

A Vigneron, P Cruaud, C Lovejoy… - ISME …, 2022 - academic.oup.com
DPANN archaea account for half of the archaeal diversity of the biosphere, but with few
cultivated representatives, their metabolic potential and environmental functions are poorly …

Genomic insights into cryptic cycles of microbial hydrocarbon production and degradation in contiguous freshwater and marine microbiomes

A Vigneron, P Cruaud, C Lovejoy, WF Vincent - Microbiome, 2023 - Springer
Background Cyanobacteria and eukaryotic phytoplankton produce long-chain alkanes and
generate around 100 times greater quantities of hydrocarbons in the ocean compared to …