The rice genome revolution: from an ancient grain to Green Super Rice
RA Wing, MD Purugganan, Q Zhang - Nature Reviews Genetics, 2018 - nature.com
Rice is a staple crop for half the world's population, which is expected to grow by 3 billion
over the next 30 years. It is also a key model for studying the genomics of agroecosystems …
over the next 30 years. It is also a key model for studying the genomics of agroecosystems …
[HTML][HTML] Plant terpenes: defense responses, phylogenetic analysis, regulation and clinical applications
B Singh, RA Sharma - 3 Biotech, 2015 - Springer
The terpenoids constitute the largest class of natural products and many interesting products
are extensively applied in the industrial sector as flavors, fragrances, spices and are also …
are extensively applied in the industrial sector as flavors, fragrances, spices and are also …
[HTML][HTML] Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution
Gossypium hirsutum has proven difficult to sequence owing to its complex allotetraploid
(AtDt) genome. Here we produce a draft genome using 181-fold paired-end sequences …
(AtDt) genome. Here we produce a draft genome using 181-fold paired-end sequences …
The genome of homosporous maidenhair fern sheds light on the euphyllophyte evolution and defences
Euphyllophytes encompass almost all extant plants, including two sister clades, ferns and
seed plants. Decoding genomes of ferns is the key to deep insight into the origin of …
seed plants. Decoding genomes of ferns is the key to deep insight into the origin of …
Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
E Tisserant, M Malbreil, A Kuo… - Proceedings of the …, 2013 - National Acad Sciences
The mutualistic symbiosis involving Glomeromycota, a distinctive phylum of early diverging
Fungi, is widely hypothesized to have promoted the evolution of land plants during the …
Fungi, is widely hypothesized to have promoted the evolution of land plants during the …
SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads
Y Xie, G Wu, J Tang, R Luo, J Patterson, S Liu… - …, 2014 - academic.oup.com
Motivation: Transcriptome sequencing has long been the favored method for quickly and
inexpensively obtaining a large number of gene sequences from an organism with no …
inexpensively obtaining a large number of gene sequences from an organism with no …
[HTML][HTML] Sequencing and de novo assembly of a near complete indica rice genome
A high-quality reference genome is critical for understanding genome structure, genetic
variation and evolution of an organism. Here we report the de novo assembly of an indica …
variation and evolution of an organism. Here we report the de novo assembly of an indica …
Polyploidy: pitfalls and paths to a paradigm
Investigators have long searched for a polyploidy paradigm—rules or principles that might
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …
[HTML][HTML] The Sorghum bicolor genome and the diversification of grasses
Sorghum, an African grass related to sugar cane and maize, is grown for food, feed, fibre
and fuel. We present an initial analysis of the∼ 730-megabase Sorghum bicolor (L.) …
and fuel. We present an initial analysis of the∼ 730-megabase Sorghum bicolor (L.) …
The genome of the cucumber, Cucumis sativus L.
Cucumber is an economically important crop as well as a model system for sex
determination studies and plant vascular biology. Here we report the draft genome …
determination studies and plant vascular biology. Here we report the draft genome …